C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamate receptor, ionotropic, NMDA3B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000045085 Grin3b-001 ENSMUSG00000035745 10090 + 10:79970715-79977190 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008XG CIL_0008XG_0002 VISTA 10:79539861-80142369
CIL_0005ZM CIL_0005ZM_0003 CGP 10:79960152-79977190
CIL_0005ZF CIL_0005ZF_0003 CGP 10:79970715-79984330

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004972 IBA N-methyl-D-aspartate selective glutamate receptor activity
GO:0005234 IBA extracellular-glutamate-gated ion channel activity
GO:0005262 IMP calcium channel activity
GO:0017146 IMP N-methyl-D-aspartate selective glutamate receptor complex
GO:0030054 IEA cell junction
GO:0030425 IBA dendrite
GO:0034220 IBA ion transmembrane transport
GO:0035235 IBA ionotropic glutamate receptor signaling pathway
GO:0035249 IBA synaptic transmission, glutamatergic
GO:0043025 IDA neuronal cell body
GO:0045211 IBA postsynaptic membrane
GO:0051205 IMP protein insertion into membrane
GO:0051924 IMP regulation of calcium ion transport
GO:0070588 IMP calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000234389 GRIN3B-001 protein_coding Homo_sapiens 0 2019
ENST00000361820 GRIN3A-001 protein_coding Homo_sapiens 0 381
ENST00000588335 GRIN3B-002 processed_transcript Homo_sapiens 0 470

Loading