C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ubiquitin-like modifier activating enzyme 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000035898 Uba6 10090 - 5:86110720-86172803 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000039373 Uba6-001 86110720-86172803 protein_coding
  ENSMUST00000113373 Uba6-003 86112342-86172511 protein_coding
  ENSMUST00000147734 Uba6-002 86120841-86172739 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039373ENSMUST00000113373ENSMUST00000147734
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039373 1.778±0.60 0.547±0.20 0.889±0.13 0.818±0.46 0.758±0.08 0.713±0.20 1.029±0.16 0.684±0.13 1.735±0.26 0.730±0.00 1.008±0.36 4.902±1.35 0.719±0.31
ENSMUST00000113373 0.536±0.23 0.260±0.13 0.778±0.32 0.774±0.39 0.400±0.11 0.312±0.06 0.244±0.06 0.233±0.19 0.764±0.00 0.369±0.00 0.483±0.14 7.031±2.59 1.023±0.30
ENSMUST00000147734 N/A 0.202±0.06 N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.08 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M6 CIL_0000M6_0002 CGP 5:86071746-86172803
CIL_0000M5 CIL_0000M5_0002 CGP 5:86110720-86197901

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 IBA cytosol
GO:0006464 IEA cellular protein modification process
GO:0006511 IMP ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019780 IMP FAT10 activating enzyme activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000080019 UBA6 ubiquitin-like modifier activating enzyme 6 protein_coding Danio_rerio
ENSG00000033178 UBA6 ubiquitin-like modifier activating enzyme 6 protein_coding Homo_sapiens

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