C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ubiquitin-like modifier activating enzyme 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000039373 Uba6-001 ENSMUSG00000035898 10090 - 5:86110720-86172803 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000039373
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000039373 1.778±0.60 0.547±0.20 0.889±0.13 0.818±0.46 0.758±0.08 0.713±0.20 1.029±0.16 0.684±0.13 1.735±0.26 0.730±0.00 1.008±0.36 4.902±1.35 0.719±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000M6 CIL_0000M6_0002 CGP 5:86071746-86172803
CIL_0000M5 CIL_0000M5_0002 CGP 5:86110720-86197901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005829 IBA cytosol
GO:0006464 IEA cellular protein modification process
GO:0006511 IMP ubiquitin-dependent protein catabolic process
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0019780 IMP FAT10 activating enzyme activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000322244 UBA6-001 protein_coding Homo_sapiens 0 3908
ENST00000420827 UBA6-002 protein_coding Homo_sapiens 0 1236
ENST00000429659 UBA6-003 retained_intron Homo_sapiens 0 1088
ENST00000505673 UBA6-005 protein_coding Homo_sapiens 0 776
ENST00000506571 UBA6-004 retained_intron Homo_sapiens 0 372
ENST00000514261 UBA6-006 nonsense_mediated_decay Homo_sapiens 0 466

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