C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000M5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000033178-ENSG00000109163 CGP 9606 4:67612652-67754360
GeneTranscriptPositionBiotype
ENSG00000033178 (UBA6)
ubiquitin-like modifier activating enzyme 6 		ENST00000322244 (UBA6-001) 67612652-67701179 protein_coding
ENST00000420827 (UBA6-002) 67661663-67701153 protein_coding
ENST00000429659 (UBA6-003) 67662487-67701148 retained_intron
ENST00000505673 (UBA6-005) 67630454-67644774 protein_coding
ENST00000506571 (UBA6-004) 67678430-67701142 retained_intron
ENST00000514261 (UBA6-006) 67618855-67625155 nonsense_mediated_decay
ENSG00000109163 (GNRHR)
gonadotropin-releasing hormone receptor 		ENST00000226413 (GNRHR-001) 67739328-67754360 protein_coding
ENST00000420975 (GNRHR-002) 67740480-67754335 protein_coding
ENSG00000202374 (SNORA62)
Small nucleolar RNA SNORA62/SNORA6 family 		ENST00000365504 (SNORA62.1-204) 67747236-67747386 snoRNA
ENSG00000248049 (UBA6-AS1)
UBA6 antisense RNA 1 (head to head) 		ENST00000498917 (UBA6-AS1-003) 67701280-67722505 antisense
ENST00000499180 (UBA6-AS1-006) 68063062-68080226 antisense
ENST00000500538 (UBA6-AS1-002) 67701361-68080952 antisense
ENST00000502758 (UBA6-AS1-004) 67732144-67790511 antisense
ENST00000506606 (UBA6-AS1-001) 67701333-67722502 antisense
ENST00000511571 (UBA6-AS1-005) 68063083-68080645 antisense
ENST00000514109 (UBA6-AS1-007) 67701395-67721018 antisense
ENSG00000250656 (ST3GAL1P1)
ST3 beta-galactoside alpha-2,3-sialyltransferase 1 pseudogene 1 		ENST00000513810 (ST3GAL1P1-001) 67716375-67717388 processed_pseudogene
ENSG00000270228 (RP11-453E17.3)
 ENST00000603040 (RP11-453E17.3-001) 67718996-67724262 processed_pseudogene
ENSG00000270257 (RP11-17P16.2)
 ENST00000604441 (RP11-17P16.2-001) 67638177-67638359 processed_pseudogene
ENSG00000270292 (RP11-453E17.4)
 ENST00000603790 (RP11-453E17.4-001) 67725183-67726395 processed_pseudogene
CIL_0000M5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000035898-ENSMUSG00000029255 CGP 10090 5:86110720-86197901
GeneTranscriptPositionBiotype
ENSMUSG00000029255 (Gnrhr)
gonadotropin releasing hormone receptor 		ENSMUST00000031172 (Gnrhr-001) 86181994-86197870 protein_coding
ENSMUST00000094654 (Gnrhr-003) 86184556-86197846 protein_coding
ENSMUST00000113372 (Gnrhr-002) 86180754-86197901 protein_coding
ENSMUSG00000035898 (Uba6)
ubiquitin-like modifier activating enzyme 6 		ENSMUST00000039373 (Uba6-001) 86110720-86172803 protein_coding
ENSMUST00000113373 (Uba6-003) 86112342-86172511 protein_coding
ENSMUST00000147734 (Uba6-002) 86120841-86172739 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M5_0001ENSG00000033178ENST00000322244ENST00000420827ENST00000429659ENST00000505673ENST00000506571ENST00000514261ENSG00000109163ENST00000226413ENST00000420975ENSG00000202374ENST00000365504ENSG00000248049ENST00000498917ENST00000499180ENST00000500538ENST00000502758ENST00000506606ENST00000511571ENST00000514109ENSG00000250656ENST00000513810ENSG00000270228ENST00000603040ENSG00000270257ENST00000604441ENSG00000270292ENST00000603790CIL_0000M5_0002ENSMUSG00000029255ENSMUST00000031172ENSMUST00000094654ENSMUST00000113372ENSMUSG00000035898ENSMUST00000039373ENSMUST00000113373ENSMUST00000147734
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000M5_0001ENSG00000033178ENST00000322244ENST00000420827ENST00000429659ENST00000505673ENSG00000109163ENST00000226413ENST00000420975ENSG00000202374ENST00000365504ENSG00000248049ENST00000498917ENST00000500538ENST00000506606ENSG00000250656ENST00000513810ENSG00000270228ENST00000603040ENSG00000270257ENST00000604441ENSG00000270292ENST00000603790CIL_0000M5_0002ENSMUSG00000029255ENSMUST00000031172ENSMUST00000094654ENSMUST00000113372ENSMUSG00000035898ENSMUST00000039373ENSMUST00000113373ENSMUST00000147734
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000033178 ENST00000322244 2.460±0.00 2.363±0.00 0.645±0.00 2.154±0.39 2.656±0.38 1.859±0.44 0.761±0.43 1.615±0.65 1.643±0.54 2.675±0.70 0.700±0.22 2.919±0.45 1.196±0.22 3.618±0.88
ENST00000420827 N/A N/A 1.404±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000429659 N/A N/A 1.010±0.00 N/A 3.506±0.00 2.107±0.00 N/A N/A 1.488±0.00 2.524±0.00 N/A 2.904±0.00 N/A N/A
ENST00000505673 N/A N/A N/A N/A N/A N/A N/A N/A 6.019±0.00 N/A N/A N/A N/A N/A
ENST00000506571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514261 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000109163 ENST00000226413 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.238±0.00 N/A N/A N/A N/A
ENST00000420975 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.184±0.00 N/A N/A N/A
ENSG00000202374 ENST00000365504 N/A N/A N/A N/A N/A N/A 0.333±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000248049 ENST00000498917 0.449±0.00 N/A N/A 1.490±0.00 1.486±0.00 1.397±0.00 0.222±0.00 2.645±0.00 1.165±0.00 0.298±0.07 0.307±0.10 1.320±0.51 1.713±0.48 1.834±0.56
ENST00000499180 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000500538 N/A 0.546±0.00 N/A 0.552±0.00 0.158±0.00 N/A 0.200±0.00 0.342±0.00 N/A N/A 0.027±0.00 N/A 0.129±0.04 0.396±0.00
ENST00000502758 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000506606 0.183±0.00 0.976±0.00 0.347±0.00 N/A 0.433±0.00 0.520±0.00 0.116±0.00 0.625±0.19 0.506±0.13 N/A 0.195±0.00 0.808±0.07 1.103±0.00 N/A
ENST00000511571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000250656 ENST00000513810 N/A N/A N/A N/A N/A 0.645±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000270228 ENST00000603040 0.404±0.00 0.784±0.00 0.476±0.00 0.851±0.19 0.704±0.00 0.682±0.00 0.188±0.03 0.650±0.32 N/A 0.321±0.13 0.134±0.00 0.963±0.42 0.567±0.00 0.964±0.00
ENSG00000270257 ENST00000604441 0.180±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.302±0.16 0.252±0.00
ENSG00000270292 ENST00000603790 N/A N/A N/A 0.148±0.00 0.049±0.00 0.860±0.00 0.430±0.00 0.260±0.17 0.658±0.00 N/A N/A 0.087±0.06 N/A 0.031±0.02
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029255 ENSMUST00000031172 N/A 0.113±0.04 0.016±0.00 N/A N/A N/A 0.077±0.00 0.025±0.00 N/A 0.032±0.00 N/A 0.168±0.08 0.082±0.05 0.022±0.00
ENSMUST00000094654 N/A N/A N/A 0.005±0.00 N/A N/A 0.032±0.00 N/A N/A N/A N/A N/A N/A 0.044±0.03
ENSMUST00000113372 0.017±0.00 0.193±0.00 0.011±0.00 0.005±0.00 N/A N/A 0.013±0.00 N/A 0.004±0.00 0.026±0.00 N/A 0.073±0.04 0.012±0.01 0.072±0.03
ENSMUSG00000035898 ENSMUST00000039373 1.778±0.60 0.547±0.20 N/A 0.889±0.13 0.818±0.46 0.758±0.08 0.713±0.20 1.029±0.16 0.684±0.13 1.735±0.26 0.730±0.00 1.008±0.36 4.902±1.35 0.719±0.31
ENSMUST00000113373 0.536±0.23 0.260±0.13 N/A 0.778±0.32 0.774±0.39 0.400±0.11 0.312±0.06 0.244±0.06 0.233±0.19 0.764±0.00 0.369±0.00 0.483±0.14 7.031±2.59 1.023±0.30
ENSMUST00000147734 N/A 0.202±0.06 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.230±0.08 N/A N/A

Loading