C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myelin regulatory factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036098 Myrf 10090 - 19:10208272-10240748 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000088013 Myrf-003 10208272-10240748 protein_coding
  ENSMUST00000186056 Myrf-001 10209704-10240745 protein_coding
  ENSMUST00000186854 Myrf-004 10210300-10217528 protein_coding
  ENSMUST00000189439 Myrf-006 10226018-10240748 retained_intron
  ENSMUST00000189897 Myrf-005 10210385-10240604 protein_coding
  ENSMUST00000190922 Myrf-002 10209305-10240748 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000088013ENSMUST00000186056ENSMUST00000186854ENSMUST00000189439ENSMUST00000189897ENSMUST00000190922
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000088013 N/A N/A N/A 0.127±0.06 0.051±0.03 N/A 0.692±0.32 N/A 2.150±1.00 N/A N/A N/A 1.319±0.96 0.146±0.00
ENSMUST00000186056 N/A 0.146±0.03 N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A
ENSMUST00000186854 2.331±1.30 0.592±0.16 0.786±0.00 0.270±0.11 0.243±0.08 0.547±0.12 1.278±0.32 3.594±1.24 4.444±1.76 12.040±0.66 0.033±0.00 6.914±1.48 2.005±0.00 0.684±0.21
ENSMUST00000189439 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189897 N/A 0.096±0.00 N/A 0.119±0.00 0.035±0.00 0.218±0.00 N/A 1.026±0.00 N/A N/A 0.017±0.00 1.822±0.49 N/A N/A
ENSMUST00000190922 N/A N/A N/A N/A 0.060±0.02 N/A N/A N/A N/A N/A N/A 1.436±0.72 0.127±0.00 0.330±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671
CIL_000057 CIL_000057_0002 CGP 19:10204014-10240748

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0014003 IMP oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0022010 IMP central nervous system myelination
GO:0031643 IMP positive regulation of myelination
GO:0032286 IMP central nervous system myelin maintenance
GO:0043565 NAS sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048709 IMP oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078676 myrf myelin regulatory factor protein_coding Danio_rerio
ENSG00000124920 MYRF myelin regulatory factor protein_coding Homo_sapiens

Loading