C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin regulatory factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000088013 Myrf-003 ENSMUSG00000036098 10090 - 19:10208272-10240748 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverPlacentaTestisENSMUST00000088013
Transcript ID Brain Breast Heart Liver Placenta Testis
ENSMUST00000088013 0.127±0.06 0.051±0.03 0.692±0.32 2.150±1.00 1.319±0.96 0.146±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671
CIL_000057 CIL_000057_0002 CGP 19:10204014-10240748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0014003 IMP oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0022010 IMP central nervous system myelination
GO:0031643 IMP positive regulation of myelination
GO:0032286 IMP central nervous system myelin maintenance
GO:0043565 NAS sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048709 IMP oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265460 MYRF-002 protein_coding Homo_sapiens 0 2833
ENST00000278836 MYRF-001 protein_coding Homo_sapiens 0 3969
ENST00000389602 MYRF-003 protein_coding Homo_sapiens 0 1733
ENST00000535042 TMEM258-008 processed_transcript Homo_sapiens 0 250
ENST00000536352 MYRF-007 retained_intron Homo_sapiens 0 492
ENST00000537318 MYRF-006 retained_intron Homo_sapiens 0 462
ENST00000537766 MYRF-005 retained_intron Homo_sapiens 0 324

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