C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000057_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078785-ENSDARG00000078676 CGP 7955 25:3943686-4035999
GeneTranscriptPositionBiotype
ENSDARG00000078676 (myrf)
myelin regulatory factor 		ENSDART00000124749 (myrf-001) 3954323-4035999 protein_coding
ENSDART00000157117 (myrf-002) 3971496-4035704 protein_coding
ENSDARG00000078785 (tmem258)
transmembrane protein 258 		ENSDART00000043172 (tmem258-001) 3943686-3949102 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_000057_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000036372-ENSMUSG00000036098 CGP 10090 19:10204014-10240748
GeneTranscriptPositionBiotype
ENSMUSG00000024742 (Fen1)
flap structure specific endonuclease 1 		ENSMUST00000025651 (Fen1-004) 10199138-10204068 protein_coding
ENSMUST00000116542 (Fen1-002) 10199138-10203943 protein_coding
ENSMUST00000142241 (Fen1-003) 10199142-10203894 protein_coding
ENSMUST00000156291 (Fen1-001) 10199132-10204169 protein_coding
ENSMUSG00000036098 (Myrf)
myelin regulatory factor 		ENSMUST00000088013 (Myrf-003) 10208272-10240748 protein_coding
ENSMUST00000186056 (Myrf-001) 10209704-10240745 protein_coding
ENSMUST00000186854 (Myrf-004) 10210300-10217528 protein_coding
ENSMUST00000189439 (Myrf-006) 10226018-10240748 retained_intron
ENSMUST00000189897 (Myrf-005) 10210385-10240604 protein_coding
ENSMUST00000190922 (Myrf-002) 10209305-10240748 retained_intron
ENSMUSG00000036372 (Tmem258)
transmembrane protein 258 		ENSMUST00000040372 (Tmem258-001) 10204014-10207824 protein_coding
ENSMUST00000127878 (Tmem258-003) 10204218-10207818 retained_intron
ENSMUST00000153854 (Tmem258-002) 10204014-10207824 processed_transcript
ENSMUST00000166412 (Tmem258-201) 10206033-10207824 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000057_0001ENSDARG00000078676ENSDART00000124749ENSDART00000157117ENSDARG00000078785ENSDART00000043172CIL_000057_0002ENSMUSG00000024742ENSMUST00000025651ENSMUST00000116542ENSMUST00000142241ENSMUST00000156291ENSMUSG00000036098ENSMUST00000088013ENSMUST00000186056ENSMUST00000186854ENSMUST00000189439ENSMUST00000189897ENSMUST00000190922ENSMUSG00000036372ENSMUST00000040372ENSMUST00000127878ENSMUST00000153854ENSMUST00000166412
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000057_0001ENSDARG00000078676ENSDART00000124749ENSDARG00000078785ENSDART00000043172CIL_000057_0002ENSMUSG00000024742ENSMUST00000025651ENSMUST00000116542ENSMUST00000142241ENSMUST00000156291ENSMUSG00000036098ENSMUST00000088013ENSMUST00000186056ENSMUST00000186854ENSMUST00000189439ENSMUST00000189897ENSMUST00000190922ENSMUSG00000036372ENSMUST00000040372ENSMUST00000127878ENSMUST00000166412
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000078676 ENSDART00000124749 N/A N/A N/A 9.140±4.12 N/A N/A 1.799±0.65 1.152±0.29 0.266±0.00 N/A 0.617±0.00 N/A N/A N/A
ENSDART00000157117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000078785 ENSDART00000043172 N/A N/A N/A 49.849±15.72 N/A N/A 53.911±16.06 21.451±7.09 18.492±0.00 N/A 31.869±0.00 N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024742 ENSMUST00000025651 4.045±1.64 4.908±0.97 2.052±0.24 4.328±0.00 3.736±0.04 3.294±0.90 N/A N/A 22.941±14.61 2.970±0.04 1.702±0.10 6.108±2.20 10.515±5.25 7.393±0.00
ENSMUST00000116542 N/A N/A 2.230±0.63 5.936±1.26 3.668±0.00 2.869±0.54 N/A N/A 29.943±13.54 2.363±0.02 1.534±0.10 8.277±1.84 13.098±5.45 N/A
ENSMUST00000142241 2.546±0.00 3.549±0.00 N/A 2.491±0.00 N/A 3.402±0.77 N/A N/A N/A 1.941±0.12 1.756±0.19 6.581±0.00 20.115±0.00 N/A
ENSMUST00000156291 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.235±0.26 N/A 8.668±0.00
ENSMUSG00000036098 ENSMUST00000088013 N/A N/A N/A 0.127±0.06 0.051±0.03 N/A 0.692±0.32 N/A 2.150±1.00 N/A N/A N/A 1.319±0.96 0.146±0.00
ENSMUST00000186056 N/A 0.146±0.03 N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A 0.019±0.00 N/A N/A N/A
ENSMUST00000186854 2.331±1.30 0.592±0.16 0.786±0.00 0.270±0.11 0.243±0.08 0.547±0.12 1.278±0.32 3.594±1.24 4.444±1.76 12.040±0.66 0.033±0.00 6.914±1.48 2.005±0.00 0.684±0.21
ENSMUST00000189439 N/A N/A N/A N/A 0.068±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000189897 N/A 0.096±0.00 N/A 0.119±0.00 0.035±0.00 0.218±0.00 N/A 1.026±0.00 N/A N/A 0.017±0.00 1.822±0.49 N/A N/A
ENSMUST00000190922 N/A N/A N/A N/A 0.060±0.02 N/A N/A N/A N/A N/A N/A 1.436±0.72 0.127±0.00 0.330±0.00
ENSMUSG00000036372 ENSMUST00000040372 45.880±5.73 49.577±5.17 39.282±0.41 33.063±18.98 51.655±20.15 58.783±6.15 78.827±12.59 65.634±4.27 75.699±29.14 36.742±5.92 36.429±8.52 44.398±7.83 66.203±33.11 134.323±54.88
ENSMUST00000127878 6.193±0.00 N/A 4.415±0.00 N/A 7.194±0.00 N/A N/A N/A N/A N/A N/A N/A 2.924±0.00 N/A
ENSMUST00000153854 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000166412 N/A N/A N/A N/A 44.787±0.00 N/A N/A N/A N/A N/A 12.381±0.82 138.930±0.00 195.255±17.73 N/A

Loading