C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myelin regulatory factor
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000189897 Myrf-005 ENSMUSG00000036098 10090 - 19:10210385-10240604 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyMuscleOvaryENSMUST00000189897
Transcript ID Adrenal Brain Breast Colon Kidney Muscle Ovary
ENSMUST00000189897 0.096±0.00 0.119±0.00 0.035±0.00 0.218±0.00 1.026±0.00 0.017±0.00 1.822±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WT CIL_0007WT_0002 VISTA 19:10121785-10724671
CIL_000057 CIL_000057_0002 CGP 19:10204014-10240748

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003700 TAS sequence-specific DNA binding transcription factor activity
GO:0005634 IDA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0006351 IEA transcription, DNA-templated
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0014003 IMP oligodendrocyte development
GO:0016021 IEA integral component of membrane
GO:0022010 IMP central nervous system myelination
GO:0031643 IMP positive regulation of myelination
GO:0032286 IMP central nervous system myelin maintenance
GO:0043565 NAS sequence-specific DNA binding
GO:0045893 IDA positive regulation of transcription, DNA-templated
GO:0048709 IMP oligodendrocyte differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265460 MYRF-002 protein_coding Homo_sapiens 0 3570
ENST00000278836 MYRF-001 protein_coding Homo_sapiens 0 2904
ENST00000389602 MYRF-003 protein_coding Homo_sapiens 0 741
ENST00000535042 TMEM258-008 processed_transcript Homo_sapiens 0 250
ENST00000536352 MYRF-007 retained_intron Homo_sapiens 0 268
ENST00000537318 MYRF-006 retained_intron Homo_sapiens 0 723

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