Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info
Description:	spindle and kinetochore associated complex subunit 1
Gene Accession	Gene Name	Tax ID	Strand	Position	Gene Biotype
ENSMUSG00000036223	Ska1	10090	-	18:74195299-74207818	protein_coding
	Transcript Accession		Transcript Name	Position	Transcript Biotype
	ENSMUST00000040188		Ska1-201	74195299-74207818	protein_coding
	ENSMUST00000177604		Ska1-202	74195299-74207818	protein_coding
Mus musculus EnsemblGRCm38 Genome Exciting message Genes Gene structures from Ensembl Connecting Transcripts Structures from Ensembl Connecting Powered by Dalliance 0.11.11

Expression Patterns

Transcript ID	Adipose	Adrenal	Bladder	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Ovary	Placenta	Testis
ENSMUST00000040188	N/A	N/A	N/A	N/A	0.032±0.01	0.091±0.05	N/A	0.081±0.00	1.323±0.00	0.028±0.00	0.163±0.01	1.623±1.80	N/A
ENSMUST00000177604	0.120±0.11	0.111±0.06	0.148±0.01	0.939±0.89	0.060±0.03	0.192±0.06	0.015±0.00	0.021±0.01	3.157±3.05	0.059±0.03	0.534±0.32	2.363±1.52	3.013±0.44

Conserved Regions
Gene is not located within a conserved region.

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0000940	ISS	condensed chromosome outer kinetochore
GO:0005515	IEA	protein binding
GO:0005737	IEA	cytoplasm
GO:0005876	ISS	spindle microtubule
GO:0007059	ISS	chromosome segregation
GO:0007067	ISS	mitotic nuclear division
GO:0008017	ISS	microtubule binding
GO:0015630	IEA	microtubule cytoskeleton
GO:0031110	ISS	regulation of microtubule polymerization or depolymerization
GO:0051301	ISS	cell division

Homologs
ENSEMBL Accession	Gene Name	Description	Biotype	Species
ENSDARG00000039354	ska1	spindle and kinetochore associated complex subunit 1	protein_coding	Danio_rerio
ENSG00000154839	SKA1	spindle and kinetochore associated complex subunit 1	protein_coding	Homo_sapiens

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