C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spindle and kinetochore associated complex subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000040188 Ska1-201 ENSMUSG00000036223 10090 - 18:74195299-74207818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonKidneyLiverLungOvaryPlacentaENSMUST00000040188
Transcript ID Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000040188 0.032±0.01 0.091±0.05 0.081±0.00 1.323±0.00 0.028±0.00 0.163±0.01 1.623±1.80

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000940 ISS condensed chromosome outer kinetochore
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0005876 ISS spindle microtubule
GO:0007059 ISS chromosome segregation
GO:0007067 ISS mitotic nuclear division
GO:0008017 ISS microtubule binding
GO:0015630 IEA microtubule cytoskeleton
GO:0031110 ISS regulation of microtubule polymerization or depolymerization
GO:0051301 ISS cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285116 SKA1-001 protein_coding Homo_sapiens 0 636
ENST00000398452 SKA1-005 protein_coding Homo_sapiens 0 634
ENST00000417656 SKA1-004 protein_coding Homo_sapiens 0 298
ENST00000571751 SKA1-001 protein_coding Homo_sapiens 0 636
ENST00000616604 SKA1-201 protein_coding Homo_sapiens 0 636

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