C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spindle and kinetochore associated complex subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000177604 Ska1-202 ENSMUSG00000036223 10090 - 18:74195299-74207818 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000177604
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000177604 0.120±0.11 0.111±0.06 0.148±0.01 0.939±0.89 0.060±0.03 0.192±0.06 0.015±0.00 0.021±0.01 3.157±3.05 0.059±0.03 0.534±0.32 2.363±1.52 3.013±0.44

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000940 ISS condensed chromosome outer kinetochore
GO:0005737 IEA cytoplasm
GO:0005876 ISS spindle microtubule
GO:0007059 ISS chromosome segregation
GO:0007067 ISS mitotic nuclear division
GO:0008017 ISS microtubule binding
GO:0031110 ISS regulation of microtubule polymerization or depolymerization
GO:0051301 ISS cell division

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285116 SKA1-001 protein_coding Homo_sapiens 0 638
ENST00000398452 SKA1-005 protein_coding Homo_sapiens 0 636
ENST00000417656 SKA1-004 protein_coding Homo_sapiens 0 300
ENST00000571751 SKA1-001 protein_coding Homo_sapiens 0 638
ENST00000616604 SKA1-201 protein_coding Homo_sapiens 0 638

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