C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calmodulin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036438 Calm2 10090 - 17:87433412-87446935 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040440 Calm2-001 87433412-87446935 protein_coding
  ENSMUST00000143965 Calm2-003 87433720-87446848 retained_intron
  ENSMUST00000150137 Calm2-002 87434894-87446849 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040440ENSMUST00000143965ENSMUST00000150137
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040440 43.150±12.97 12.866±0.86 284.788±33.13 234.669±16.45 23.938±8.46 38.629±3.60 28.537±3.20 43.177±10.77 84.614±75.61 65.183±13.55 114.660±6.84 52.289±65.66 195.509±107.01 137.809±48.76
ENSMUST00000143965 N/A 6.036±0.38 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150137 N/A N/A N/A 1926.150±0.00 N/A N/A N/A N/A 57.725±13.14 N/A N/A 240.074±235.68 748.501±333.24 1719.800±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol

Homologs

No Homologs available.

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