C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: calmodulin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000143965 Calm2-003 ENSMUSG00000036438 10090 - 17:87433720-87446848 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalENSMUST00000143965
Transcript ID Adrenal
ENSMUST00000143965 6.036±0.38

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D2 CIL_0008D2_0002 VISTA 17:87075116-87678515

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000272298 CALM2-001 protein_coding Homo_sapiens 0 920
ENST00000400429 CALM2P3-001 processed_pseudogene Homo_sapiens 0 355
ENST00000409563 CALM2-007 protein_coding Homo_sapiens 0 484
ENST00000422269 RP11-761B3.1-001 nonsense_mediated_decay Homo_sapiens 3e-28 130
ENST00000428512 CALM2P2-001 processed_pseudogene Homo_sapiens 0 344
ENST00000430810 CALM2P4-001 processed_pseudogene Homo_sapiens 0 326
ENST00000432899 CALM2-002 nonsense_mediated_decay Homo_sapiens 0 734
ENST00000456319 CALM2-006 protein_coding Homo_sapiens 0 641
ENST00000460218 CALM2-003 retained_intron Homo_sapiens 0 920
ENST00000482532 CALM2-004 retained_intron Homo_sapiens 0 702
ENST00000484408 CALM2-009 processed_transcript Homo_sapiens 0 374
ENST00000489742 CALM2-008 processed_transcript Homo_sapiens 0 215
ENST00000585658 CALM2P1-001 processed_pseudogene Homo_sapiens 0 350

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