C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: plexin B2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036606 Plxnb2 10090 - 15:89155549-89171120 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000060808 Plxnb2-201 89155549-89170688 protein_coding
  ENSMUST00000109331 Plxnb2-001 89155549-89171120 protein_coding
  ENSMUST00000131062 Plxnb2-002 89164891-89165797 processed_transcript
  ENSMUST00000139372 Plxnb2-003 89161011-89161547 processed_transcript
  ENSMUST00000143014 Plxnb2-005 89155549-89156579 processed_transcript
  ENSMUST00000151418 Plxnb2-004 89155981-89157244 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000060808ENSMUST00000109331
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000060808 N/A N/A N/A N/A 4.276±0.00 N/A 2.776±0.11 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000109331 22.917±14.47 39.897±1.90 26.691±5.30 40.761±29.78 21.482±10.09 95.582±3.89 13.203±5.36 47.960±10.29 22.158±14.34 51.060±1.83 1.170±0.58 57.655±17.42 23.578±11.20 17.083±5.95

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009A CIL_00009A_0002 CGP 15:89142486-89171120

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001843 IMP neural tube closure
GO:0001932 IMP regulation of protein phosphorylation
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005887 IDA integral component of plasma membrane
GO:0007405 IMP neuroblast proliferation
GO:0007420 IMP brain development
GO:0008360 IMP regulation of cell shape
GO:0009986 IEA cell surface
GO:0017154 IMP semaphorin receptor activity
GO:0032319 IMP regulation of Rho GTPase activity
GO:0050772 IGI positive regulation of axonogenesis
GO:0070062 IEA extracellular vesicular exosome
GO:0071526 IMP semaphorin-plexin signaling pathway
GO:2001222 IMP regulation of neuron migration

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003811 plxnb2a plexin b2a protein_coding Danio_rerio
ENSDARG00000036985 plxnb2b plexin b2b protein_coding Danio_rerio
ENSDARG00000094799 plxnb2a plexin b2a protein_coding Danio_rerio
ENSG00000196576 PLXNB2 plexin B2 protein_coding Homo_sapiens

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