C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase type 13A2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036622 Atp13a2 10090 + 4:140986873-141007330 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037055 Atp13a2-001 140986873-141007330 protein_coding
  ENSMUST00000125797 Atp13a2-003 140986990-140998167 retained_intron
  ENSMUST00000127833 Atp13a2-004 140986873-141007330 protein_coding
  ENSMUST00000135117 Atp13a2-006 140996212-141000873 processed_transcript
  ENSMUST00000137630 Atp13a2-007 141004417-141006723 retained_intron
  ENSMUST00000151517 Atp13a2-002 140986900-141007330 retained_intron
  ENSMUST00000156995 Atp13a2-005 140995602-141001934 processed_transcript
  ENSMUST00000168047 Atp13a2-008 140986873-141005087 protein_coding
  ENSMUST00000170797 Atp13a2-009 141000711-141002090 processed_transcript

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037055ENSMUST00000125797ENSMUST00000127833ENSMUST00000137630ENSMUST00000151517ENSMUST00000156995
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037055 14.319±0.80 29.297±4.93 9.844±1.02 22.536±7.02 25.677±9.00 12.151±1.64 3.880±0.99 7.305±1.53 5.626±1.11 28.062±7.64 4.388±1.51 25.629±9.50 3.751±1.71 3.183±1.19
ENSMUST00000125797 N/A N/A N/A N/A 1.973±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127833 7.671±0.61 13.279±1.82 5.906±0.10 28.979±1.47 9.580±3.91 7.425±1.38 2.634±0.39 4.774±0.56 3.381±0.88 16.387±1.50 5.279±1.46 15.154±4.88 2.599±1.80 3.866±1.34
ENSMUST00000137630 N/A N/A N/A N/A 16.904±0.00 N/A N/A N/A N/A N/A N/A 12.894±0.00 N/A N/A
ENSMUST00000151517 4.136±0.25 6.720±1.90 4.766±0.82 13.466±1.55 9.296±1.26 4.239±0.92 1.701±0.34 2.176±0.24 1.761±0.39 13.154±1.00 1.226±0.00 9.159±1.54 1.112±0.00 2.602±0.45
ENSMUST00000156995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.957±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005764 ISS lysosome
GO:0005765 IEA lysosomal membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061890 atp13a2 ATPase type 13A2 protein_coding Danio_rerio
ENSG00000159363 ATP13A2 ATPase type 13A2 protein_coding Homo_sapiens

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