C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000125797 Atp13a2-003 ENSMUSG00000036622 10090 + 4:140986990-140998167 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENSMUST00000125797
Transcript ID Breast
ENSMUST00000125797 1.973±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253686 MRPS25-001 protein_coding Homo_sapiens 0.0000001 64
ENST00000269919 PGPEP1-001 protein_coding Homo_sapiens 0.000003 60
ENST00000307089 NSUN4-003 nonsense_mediated_decay Homo_sapiens 0.00000001 68
ENST00000324306 ZKSCAN1-001 protein_coding Homo_sapiens 0.000001 62
ENST00000326735 ATP13A2-001 protein_coding Homo_sapiens 0 1075
ENST00000327171 GALK2-001 protein_coding Homo_sapiens 0.0000006 62
ENST00000330493 MGAT4EP-001 processed_transcript Homo_sapiens 0.00000008 64
ENST00000341319 KLHL6-001 protein_coding Homo_sapiens 0.0000007 62
ENST00000341676 ATP13A2-002 protein_coding Homo_sapiens 0 1140
ENST00000343499 ZNF177-002 protein_coding Homo_sapiens 0.00003 55
ENST00000368008 NIT1-002 protein_coding Homo_sapiens 0.000003 58
ENST00000395738 ADM2-001 protein_coding Homo_sapiens 0.00000001 68
ENST00000396981 UBE2G1-001 protein_coding Homo_sapiens 0.000006 58
ENST00000423831 ENPP3-003 nonsense_mediated_decay Homo_sapiens 0.00000006 62
ENST00000427707 ENPP3-005 nonsense_mediated_decay Homo_sapiens 0.0000002 62
ENST00000428012 KDM5C-013 nonsense_mediated_decay Homo_sapiens 0.0000003 60
ENST00000446085 ZNF559-ZNF177-002 protein_coding Homo_sapiens 0.00004 55
ENST00000446941 ABCC5-002 protein_coding Homo_sapiens 0.000004 57
ENST00000449354 MRPS25-003 protein_coding Homo_sapiens 0.00000003 64
ENST00000452699 ATP13A2-005 protein_coding Homo_sapiens 0 1140
ENST00000455539 ICA1-005 nonsense_mediated_decay Homo_sapiens 0.0000008 60
ENST00000459807 TRIM27-004 processed_transcript Homo_sapiens 0.0000002 64
ENST00000463860 ATP13A2-003 retained_intron Homo_sapiens 0 396
ENST00000468047 TRIM27-004 processed_transcript Homo_sapiens 0.0000002 64
ENST00000470637 ABCD4-009 nonsense_mediated_decay Homo_sapiens 0.0000003 60
ENST00000474866 MRPS25-007 processed_transcript Homo_sapiens 0.00000002 64
ENST00000478570 CADPS-003 retained_intron Homo_sapiens 0.000000005 68
ENST00000481474 TRIM27-004 retained_intron Homo_sapiens 0.0000002 64
ENST00000485666 TRIM27-004 processed_transcript Homo_sapiens 0.0000002 64
ENST00000485764 GCNT2-017 processed_transcript Homo_sapiens 0.0000000001 71
ENST00000487162 TYMP-004 retained_intron Homo_sapiens 0.0000008 60
ENST00000489245 KLHL6-004 retained_intron Homo_sapiens 0.0000005 62
ENST00000489678 ABCD4-015 retained_intron Homo_sapiens 0.000001 60
ENST00000493318 TRIM27-006 retained_intron Homo_sapiens 0.0000002 64
ENST00000495323 TRIM27-004 processed_transcript Homo_sapiens 0.0000002 64
ENST00000495519 KDM5C-002 processed_transcript Homo_sapiens 0.0000002 60
ENST00000496484 MRPS25-006 processed_transcript Homo_sapiens 0.00000002 64
ENST00000497891 EPHA1-003 retained_intron Homo_sapiens 0.00000002 64
ENST00000502860 ATP13A2-006 retained_intron Homo_sapiens 0 204
ENST00000506174 ATP13A2-012 protein_coding Homo_sapiens 0 215
ENST00000508222 ATP13A2-008 protein_coding Homo_sapiens 0 381
ENST00000509619 ATP13A2-010 protein_coding Homo_sapiens 0 549
ENST00000510069 ATP13A2-009 protein_coding Homo_sapiens 0 955
ENST00000511153 PROM1-005 nonsense_mediated_decay Homo_sapiens 0.000002 58
ENST00000511957 ATP13A2-011 protein_coding Homo_sapiens 0 322
ENST00000535170 ZKSCAN1-201 protein_coding Homo_sapiens 0.000001 62
ENST00000541595 ZNF559-ZNF177-001 protein_coding Homo_sapiens 0.00004 55
ENST00000555235 MARK3-010 retained_intron Homo_sapiens 0.000000000009 77
ENST00000556152 AP1G2-024 retained_intron Homo_sapiens 0.0000009 58
ENST00000569224 DDX19B-012 retained_intron Homo_sapiens 0.000000006 66
ENST00000584259 ENOSF1-005 retained_intron Homo_sapiens 0.0000007 62
ENST00000589624 TBCB-014 nonsense_mediated_decay Homo_sapiens 0.00000006 62
ENST00000592912 ZNF177-005 protein_coding Homo_sapiens 0.00001 55
ENST00000593242 ZNF559-ZNF177-015 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000603024 ZNF559-ZNF177-003 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000603656 ZNF559-ZNF177-014 protein_coding Homo_sapiens 0.00001 55
ENST00000603974 ZNF559-ZNF177-008 nonsense_mediated_decay Homo_sapiens 0.00002 55
ENST00000604543 ZNF559-ZNF177-013 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000604886 ZNF559-ZNF177-011 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000605006 ZNF559-ZNF177-009 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000605093 ZNF559-ZNF177-010 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000605471 ZNF559-ZNF177-016 processed_transcript Homo_sapiens 0.00001 55
ENST00000605775 ZNF559-ZNF177-012 nonsense_mediated_decay Homo_sapiens 0.00001 55
ENST00000614994 ZNF285-002 protein_coding Homo_sapiens 0.0000002 64
ENST00000617114 ATP13A2-201 protein_coding Homo_sapiens 0 1140
ENST00000620510 ZKSCAN1-202 protein_coding Homo_sapiens 0.000001 62

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