C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase type 13A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000037055 Atp13a2-001 ENSMUSG00000036622 10090 + 4:140986873-141007330 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037055 14.319±0.80 29.297±4.93 9.844±1.02 22.536±7.02 25.677±9.00 12.151±1.64 3.880±0.99 7.305±1.53 5.626±1.11 28.062±7.64 4.388±1.51 25.629±9.50 3.751±1.71 3.183±1.19

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005764 ISS lysosome
GO:0005765 IEA lysosomal membrane
GO:0006200 IEA ATP catabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000326735 ATP13A2-001 protein_coding Homo_sapiens 0 3640
ENST00000341676 ATP13A2-002 protein_coding Homo_sapiens 0 2527
ENST00000452699 ATP13A2-005 protein_coding Homo_sapiens 0 3705
ENST00000463860 ATP13A2-003 retained_intron Homo_sapiens 0 963
ENST00000466561 ATP13A2-004 retained_intron Homo_sapiens 0 1048
ENST00000502418 ATP13A2-007 protein_coding Homo_sapiens 0 837
ENST00000502860 ATP13A2-006 retained_intron Homo_sapiens 0 340
ENST00000503552 ATP13A2-014 protein_coding Homo_sapiens 0 449
ENST00000506174 ATP13A2-012 protein_coding Homo_sapiens 0 555
ENST00000508222 ATP13A2-008 protein_coding Homo_sapiens 0 381
ENST00000509619 ATP13A2-010 protein_coding Homo_sapiens 0 549
ENST00000510069 ATP13A2-009 protein_coding Homo_sapiens 0 955
ENST00000511957 ATP13A2-011 protein_coding Homo_sapiens 0 322
ENST00000617114 ATP13A2-201 protein_coding Homo_sapiens 0 1277

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