C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase type 13A2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000159363 ATP13A2 9606 - 1:16985958-17011928 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000326735 ATP13A2-001 16985958-17011772 protein_coding
  ENST00000341676 ATP13A2-002 16985958-17011915 protein_coding
  ENST00000452699 ATP13A2-005 16985958-17011928 protein_coding
  ENST00000463860 ATP13A2-003 16995487-17000847 retained_intron
  ENST00000466561 ATP13A2-004 16985959-16991858 retained_intron
  ENST00000502418 ATP13A2-007 16985981-16990003 protein_coding
  ENST00000502860 ATP13A2-006 16995859-17000291 retained_intron
  ENST00000503552 ATP13A2-014 16990175-16996283 protein_coding
  ENST00000506174 ATP13A2-012 16996087-17000312 protein_coding
  ENST00000508222 ATP13A2-008 17000283-17005395 protein_coding
  ENST00000509392 ATP13A2-013 16996034-16996694 retained_intron
  ENST00000509619 ATP13A2-010 17002320-17005765 protein_coding
  ENST00000510069 ATP13A2-009 17000011-17005714 protein_coding
  ENST00000511957 ATP13A2-011 17000269-17005072 protein_coding
  ENST00000617114 ATP13A2-201 16995859-17011928 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000326735ENST00000341676ENST00000452699ENST00000463860ENST00000466561ENST00000502418ENST00000503552ENST00000509619ENST00000510069ENST00000511957ENST00000617114
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000326735 7.624±0.00 8.324±0.00 0.258±0.00 8.374±3.95 4.646±0.00 2.515±0.00 N/A 3.116±0.00 N/A N/A N/A 6.175±3.36 9.086±4.12 4.956±0.00
ENST00000341676 N/A N/A N/A N/A 0.684±0.00 N/A 0.098±0.00 N/A N/A N/A 0.194±0.00 2.748±0.00 N/A N/A
ENST00000452699 5.069±0.00 N/A N/A 8.441±6.72 5.220±0.00 N/A 0.954±0.00 1.469±0.00 1.071±0.00 4.758±0.00 6.552±0.00 2.636±0.84 3.898±0.73 3.071±0.64
ENST00000463860 N/A N/A 0.455±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466561 N/A 11.573±0.00 N/A 3.336±0.00 4.821±0.00 N/A N/A 0.156±0.00 N/A 9.301±0.00 3.181±0.00 3.006±1.89 N/A 3.978±0.00
ENST00000502418 N/A N/A N/A 27.306±0.00 N/A 3.872±0.00 1.283±0.00 7.618±0.00 1.789±0.00 N/A 4.502±0.00 17.661±0.00 11.786±0.00 4.482±0.00
ENST00000503552 N/A N/A N/A N/A N/A N/A 0.662±0.00 N/A N/A 0.890±0.00 N/A 17.033±14.91 12.668±0.00 6.297±0.00
ENST00000509619 N/A N/A N/A N/A N/A N/A 0.816±0.00 N/A 0.588±0.00 1.320±0.00 N/A N/A N/A N/A
ENST00000510069 N/A N/A 0.857±0.00 N/A N/A 1.667±0.00 N/A N/A 0.624±0.00 N/A N/A N/A N/A N/A
ENST00000511957 N/A N/A N/A N/A 3.748±0.00 N/A N/A N/A N/A 1.352±0.00 N/A N/A N/A N/A
ENST00000617114 N/A N/A N/A N/A N/A 0.717±0.00 N/A 0.080±0.00 0.218±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000235 CIL_000235_0002 CGP 1:16985958-17054170

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005764 IDA lysosome
GO:0005765 IDA lysosomal membrane
GO:0006200 IEA ATP catabolic process
GO:0006812 IEA cation transport
GO:0008219 IEA cell death
GO:0016021 IEA integral component of membrane
GO:0016887 NAS:IEA ATPase activity
GO:0019829 IEA cation-transporting ATPase activity
GO:0046872 IEA metal ion binding
GO:0071287 TAS cellular response to manganese ion
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000061890 atp13a2 ATPase type 13A2 protein_coding Danio_rerio
ENSMUSG00000036622 Atp13a2 ATPase type 13A2 protein_coding Mus_musculus

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