C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, CCHC domain containing 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000115258 Zcchc12-002 ENSMUSG00000036699 10090 + X:36195904-36199150 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainColonLiverOvaryTestisENSMUST00000115258
Transcript ID Adrenal Brain Colon Liver Ovary Testis
ENSMUST00000115258 0.553±0.11 4.847±0.00 0.658±0.15 0.040±0.00 0.449±0.16 0.240±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000715 CIL_000715_0002 CGP X:36112110-36199158
CIL_00071C CIL_00071C_0002 CGP X:36195904-36362341

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016607 IDA nuclear speck
GO:0030374 IDA ligand-dependent nuclear receptor transcription coactivator activity
GO:0030509 IDA BMP signaling pathway
GO:0032183 IDA SUMO binding
GO:2000327 IDA positive regulation of ligand-dependent nuclear receptor transcription coactivator activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000310164 ZCCHC12-001 protein_coding Homo_sapiens 0 1153
ENST00000537356 ZCCHC18-006 protein_coding Homo_sapiens 0 941
ENST00000611638 ZCCHC18-201 protein_coding Homo_sapiens 0 1037

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