C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sad1 and UNC84 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036817 Sun1 10090 + 5:139200637-139249840 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058716 Sun1-001 139200637-139249840 protein_coding
  ENSMUST00000078690 Sun1-004 139200680-139248549 protein_coding
  ENSMUST00000100517 Sun1-008 139200667-139228340 protein_coding
  ENSMUST00000110882 Sun1-005 139212027-139248643 protein_coding
  ENSMUST00000110883 Sun1-002 139200643-139249795 protein_coding
  ENSMUST00000110884 Sun1-003 139200660-139249795 protein_coding
  ENSMUST00000123414 Sun1-015 139200675-139215775 retained_intron
  ENSMUST00000126108 Sun1-020 139231104-139234543 retained_intron
  ENSMUST00000126110 Sun1-017 139225309-139234701 processed_transcript
  ENSMUST00000127045 Sun1-009 139200669-139223739 protein_coding
  ENSMUST00000127310 Sun1-021 139241354-139248506 nonsense_mediated_decay
  ENSMUST00000128817 Sun1-006 139235577-139245367 protein_coding
  ENSMUST00000129079 Sun1-014 139212267-139225361 protein_coding
  ENSMUST00000135720 Sun1-018 139225276-139229939 protein_coding
  ENSMUST00000135926 Sun1-019 139226743-139235625 protein_coding
  ENSMUST00000136311 Sun1-012 139211941-139212288 processed_transcript
  ENSMUST00000142473 Sun1-007 139200667-139228339 retained_intron
  ENSMUST00000143562 Sun1-010 139200671-139226598 protein_coding
  ENSMUST00000146715 Sun1-011 139200685-139226604 protein_coding
  ENSMUST00000148772 Sun1-013 139211973-139225397 protein_coding
  ENSMUST00000153469 Sun1-016 139223678-139230832 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058716ENSMUST00000078690ENSMUST00000110882ENSMUST00000110883ENSMUST00000110884ENSMUST00000128817ENSMUST00000142473
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058716 8.501±2.40 22.835±4.38 15.480±2.31 4.087±0.36 8.602±3.77 14.025±2.60 1.667±0.11 4.926±2.18 5.913±3.56 13.599±3.49 1.596±0.21 19.834±4.93 16.254±6.51 5.114±0.66
ENSMUST00000078690 4.899±0.71 5.645±0.00 N/A 8.179±0.29 3.692±0.15 N/A 5.349±1.04 4.785±1.45 1.194±0.32 6.315±0.73 N/A 9.309±0.54 N/A 7.838±1.22
ENSMUST00000110882 4.281±0.00 10.466±0.00 N/A N/A 4.016±0.25 6.404±0.62 N/A N/A 1.052±0.21 N/A N/A 11.377±0.90 N/A 13.490±4.01
ENSMUST00000110883 3.022±0.00 N/A 9.865±0.39 10.921±0.77 3.392±0.14 N/A 4.888±0.64 2.642±0.00 1.720±0.54 4.161±0.00 3.950±1.37 5.694±0.00 4.750±1.40 5.348±1.19
ENSMUST00000110884 6.841±0.99 7.747±0.61 6.409±0.27 4.125±0.00 5.393±1.20 7.073±0.83 2.888±0.57 4.572±2.10 2.296±0.93 8.379±1.22 2.468±0.25 6.529±0.58 5.963±1.82 4.640±0.15
ENSMUST00000128817 N/A N/A N/A 35.195±0.00 N/A N/A N/A N/A N/A N/A N/A 43.049±0.00 39.633±18.39 55.641±0.00
ENSMUST00000142473 N/A N/A N/A 6.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018K CIL_00018K_0002 CGP 5:139150223-139249840
CIL_00018J CIL_00018J_0002 CGP 5:139200637-139270051

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002080 IDA acrosomal membrane
GO:0005515 IPI protein binding
GO:0005521 IDA lamin binding
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005639 IDA integral component of nuclear inner membrane
GO:0005737 IDA cytoplasm
GO:0006998 IEA nuclear envelope organization
GO:0016021 IDA integral component of membrane
GO:0090286 IEA cytoskeletal anchoring at nuclear membrane
GO:0090292 IEA nuclear matrix anchoring at nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055350 sun1 Sad1 and UNC84 domain containing 1 protein_coding Danio_rerio
ENSDARG00000077178 SUN1 (2 of 2) Sad1 and UNC84 domain containing 1 protein_coding Danio_rerio
ENSG00000164828 SUN1 Sad1 and UNC84 domain containing 1 protein_coding Homo_sapiens

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