C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Sad1 and UNC84 domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000164828 SUN1 9606 + 7:816615-896435 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340926 SUN1-003 832501-850767 retained_intron
  ENST00000389574 SUN1-002 816615-874902 protein_coding
  ENST00000401592 SUN1-005 832501-874902 protein_coding
  ENST00000403868 SUN1-007 832503-843818 protein_coding
  ENST00000405266 SUN1-001 832501-874900 protein_coding
  ENST00000413171 SUN1-004 832501-874902 retained_intron
  ENST00000419312 SUN1-027 843341-851481 protein_coding
  ENST00000421580 SUN1-019 831922-842019 protein_coding
  ENST00000424128 SUN1-017 816866-838986 protein_coding
  ENST00000425407 SUN1-201 832505-874920 protein_coding
  ENST00000427969 SUN1-014 816615-842568 processed_transcript
  ENST00000429178 SUN1-008 843370-874899 protein_coding
  ENST00000433212 SUN1-012 848608-874902 protein_coding
  ENST00000435699 SUN1-013 816623-843385 protein_coding
  ENST00000439679 SUN1-016 816755-842086 protein_coding
  ENST00000440380 SUN1-015 816643-838986 protein_coding
  ENST00000450538 SUN1-021 816615-843006 processed_transcript
  ENST00000450881 SUN1-024 838796-852651 protein_coding
  ENST00000452783 SUN1-202 816615-874920 protein_coding
  ENST00000457378 SUN1-203 816615-843872 protein_coding
  ENST00000457598 SUN1-018 830930-842035 protein_coding
  ENST00000457861 SUN1-033 851950-896435 nonsense_mediated_decay
  ENST00000459810 SUN1-032 852192-852902 retained_intron
  ENST00000463848 SUN1-031 851550-852773 retained_intron
  ENST00000464442 SUN1-028 849801-852907 retained_intron
  ENST00000467483 SUN1-022 832505-843834 retained_intron
  ENST00000469755 SUN1-020 832955-842073 processed_transcript
  ENST00000471349 SUN1-026 842921-848494 retained_intron
  ENST00000475971 SUN1-010 852247-874902 retained_intron
  ENST00000477950 SUN1-034 841912-843669 retained_intron
  ENST00000480475 SUN1-029 849817-852878 retained_intron
  ENST00000483996 SUN1-023 832507-839180 retained_intron
  ENST00000488628 SUN1-030 851167-852824 retained_intron
  ENST00000493681 SUN1-025 841816-848421 retained_intron
  ENST00000497943 SUN1-011 868474-874902 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340926ENST00000389574ENST00000401592ENST00000405266ENST00000413171ENST00000429178ENST00000433212ENST00000452783ENST00000457861ENST00000475971
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340926 N/A N/A N/A N/A N/A N/A N/A N/A 8.360±0.00 N/A N/A N/A N/A N/A
ENST00000389574 N/A N/A N/A N/A N/A N/A N/A 6.203±0.00 N/A N/A N/A N/A N/A 21.253±14.55
ENST00000401592 N/A N/A 3.101±0.00 4.972±2.35 N/A N/A 8.780±0.00 N/A N/A 5.449±1.32 5.663±0.00 9.681±2.71 7.810±0.95 N/A
ENST00000405266 11.881±0.00 N/A N/A 3.304±0.00 7.722±0.00 4.491±0.00 N/A N/A N/A 6.703±0.00 10.452±0.11 N/A N/A N/A
ENST00000413171 N/A 5.609±0.00 1.653±0.00 N/A 6.688±0.00 N/A N/A 4.078±0.00 N/A N/A N/A 8.339±0.00 N/A N/A
ENST00000429178 8.155±0.00 N/A N/A N/A 4.960±0.00 4.107±0.79 12.543±0.00 5.735±0.00 3.484±1.48 4.575±0.00 8.413±0.00 14.401±5.44 7.044±1.64 6.074±0.00
ENST00000433212 7.324±0.00 11.750±0.00 N/A 5.781±0.00 14.407±0.00 12.300±0.00 N/A 11.505±0.00 2.082±0.00 7.741±0.00 N/A 18.963±2.76 9.899±2.75 10.406±0.00
ENST00000452783 N/A N/A N/A N/A N/A 5.653±0.00 6.017±0.00 N/A N/A 7.372±0.00 6.220±0.00 N/A N/A 7.188±0.00
ENST00000457861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.189±0.00
ENST00000475971 N/A N/A 1.457±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018K CIL_00018K_0001 CGP 7:726701-896435
CIL_00018J CIL_00018J_0001 CGP 7:816615-896436

Gene Ontology
GO IDEvidence TypeGO Description
GO:0002080 IEA acrosomal membrane
GO:0005515 IPI protein binding
GO:0005521 IEA lamin binding
GO:0005634 IEA nucleus
GO:0005635 IDA nuclear envelope
GO:0005639 IEA integral component of nuclear inner membrane
GO:0005737 IEA cytoplasm
GO:0006998 IGI nuclear envelope organization
GO:0016021 IEA integral component of membrane
GO:0034993 IDA:IEA SUN-KASH complex
GO:0090286 IDA cytoskeletal anchoring at nuclear membrane
GO:0090292 IDA nuclear matrix anchoring at nuclear membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000055350 sun1 Sad1 and UNC84 domain containing 1 protein_coding Danio_rerio
ENSDARG00000077178 SUN1 (2 of 2) Sad1 and UNC84 domain containing 1 protein_coding Danio_rerio
ENSMUSG00000036817 Sun1 Sad1 and UNC84 domain containing 1 protein_coding Mus_musculus

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