C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Sad1 and UNC84 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000058716 Sun1-001 ENSMUSG00000036817 10090 + 5:139200637-139249840 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058716
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058716 8.501±2.40 22.835±4.38 15.480±2.31 4.087±0.36 8.602±3.77 14.025±2.60 1.667±0.11 4.926±2.18 5.913±3.56 13.599±3.49 1.596±0.21 19.834±4.93 16.254±6.51 5.114±0.66

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00018K CIL_00018K_0002 CGP 5:139150223-139249840
CIL_00018J CIL_00018J_0002 CGP 5:139200637-139270051

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002080 IDA acrosomal membrane
GO:0005515 IPI protein binding
GO:0005521 IDA lamin binding
GO:0005634 IDA nucleus
GO:0005635 IDA nuclear envelope
GO:0005639 IDA integral component of nuclear inner membrane
GO:0005737 IDA cytoplasm
GO:0006998 IEA nuclear envelope organization
GO:0016021 IDA integral component of membrane
GO:0090286 IEA cytoskeletal anchoring at nuclear membrane
GO:0090292 IEA nuclear matrix anchoring at nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389574 SUN1-002 protein_coding Homo_sapiens 0 226
ENST00000401592 SUN1-005 protein_coding Homo_sapiens 0 250
ENST00000405266 SUN1-001 protein_coding Homo_sapiens 0 257
ENST00000413171 SUN1-004 retained_intron Homo_sapiens 0 606
ENST00000425407 SUN1-201 protein_coding Homo_sapiens 0 231
ENST00000427969 SUN1-014 processed_transcript Homo_sapiens 0.000000000002 77
ENST00000429178 SUN1-008 protein_coding Homo_sapiens 0 250
ENST00000433212 SUN1-012 protein_coding Homo_sapiens 0 263
ENST00000435699 SUN1-013 protein_coding Homo_sapiens 0.000000000003 77
ENST00000440380 SUN1-015 protein_coding Homo_sapiens 0.000003 57
ENST00000450538 SUN1-021 processed_transcript Homo_sapiens 0 318
ENST00000450881 SUN1-024 protein_coding Homo_sapiens 1.99993e-41 172
ENST00000452783 SUN1-202 protein_coding Homo_sapiens 0 318
ENST00000457378 SUN1-203 protein_coding Homo_sapiens 0.000000000005 77
ENST00000457861 SUN1-033 nonsense_mediated_decay Homo_sapiens 0 215
ENST00000463848 SUN1-031 retained_intron Homo_sapiens 0 196
ENST00000464442 SUN1-028 retained_intron Homo_sapiens 0 241
ENST00000475971 SUN1-010 retained_intron Homo_sapiens 0 226
ENST00000480475 SUN1-029 retained_intron Homo_sapiens 0 226
ENST00000488628 SUN1-030 retained_intron Homo_sapiens 0 220
ENST00000497943 SUN1-011 retained_intron Homo_sapiens 0 226

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