C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycosyltransferase-like domain containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000036890 Gtdc1 10090 - 2:44564412-44927657 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049051 Gtdc1-201 44564415-44756437 protein_coding
  ENSMUST00000100127 Gtdc1-202 44785490-44927236 protein_coding
  ENSMUST00000112810 Gtdc1-001 44564412-44861622 protein_coding
  ENSMUST00000129240 Gtdc1-002 44633129-44927264 processed_transcript
  ENSMUST00000130991 Gtdc1-008 44575478-44927161 protein_coding
  ENSMUST00000133442 Gtdc1-006 44791193-44927149 processed_transcript
  ENSMUST00000134813 Gtdc1-011 44565133-44571347 processed_transcript
  ENSMUST00000143333 Gtdc1-010 44570370-44571714 processed_transcript
  ENSMUST00000143766 Gtdc1-004 44788728-44927234 processed_transcript
  ENSMUST00000146694 Gtdc1-007 44591910-44862275 protein_coding
  ENSMUST00000148279 Gtdc1-003 44635264-44927657 protein_coding
  ENSMUST00000148786 Gtdc1-009 44751895-44825403 processed_transcript
  ENSMUST00000154744 Gtdc1-005 44756268-44862275 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000049051ENSMUST00000112810ENSMUST00000130991ENSMUST00000146694ENSMUST00000148279ENSMUST00000154744
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000049051 1.322±0.64 0.743±0.09 1.496±0.52 5.645±3.48 1.418±0.49 0.748±0.16 1.378±0.33 1.938±0.61 1.683±0.65 1.725±0.81 4.178±1.94 1.659±0.45 2.625±0.73 3.965±1.40
ENSMUST00000112810 0.879±0.08 0.713±0.00 1.016±0.21 3.476±1.79 2.069±0.59 0.215±0.00 0.611±0.00 N/A 1.645±1.03 0.614±0.00 1.303±0.10 1.356±0.17 1.266±0.58 2.330±0.23
ENSMUST00000130991 1.680±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.206±0.21 N/A N/A
ENSMUST00000146694 N/A N/A N/A N/A 3.567±0.00 N/A N/A N/A N/A N/A N/A 2.055±0.00 N/A N/A
ENSMUST00000148279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.859±0.00 N/A N/A N/A
ENSMUST00000154744 2.681±0.61 3.865±0.95 N/A 15.474±0.00 4.943±1.80 2.659±0.88 2.863±0.25 3.578±1.25 2.083±0.78 3.878±1.42 N/A 12.009±17.65 6.886±2.45 13.264±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M8 CIL_0006M8_0002 CGP 2:43748824-44927657
CIL_0007L9 CIL_0007L9_0005 UCNEbase 2:43782078-47834434
CIL_0008S0 CIL_0008S0_0002 VISTA 2:44272995-44874695
CIL_0006M9 CIL_0006M9_0002 CGP 2:44564412-45117395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009058 IEA biosynthetic process
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020642 gtdc1 glycosyltransferase-like domain containing 1 protein_coding Danio_rerio
ENSG00000121964 GTDC1 glycosyltransferase-like domain containing 1 protein_coding Homo_sapiens

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