C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008S0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs404 VISTA 9606 2:143654622-144256346
GeneTranscriptPositionBiotype
ENSG00000075884 (ARHGAP15)
Rho GTPase activating protein 15 		ENST00000295095 (ARHGAP15-001) 143129314-143768352 protein_coding
ENST00000409869 (ARHGAP15-002) 143091362-143238352 protein_coding
ENST00000419455 (ARHGAP15-006) 143556408-143624267 nonsense_mediated_decay
ENST00000460776 (ARHGAP15-003) 143193384-143435699 processed_transcript
ENST00000469117 (ARHGAP15-005) 143247290-143437042 processed_transcript
ENST00000473426 (ARHGAP15-007) 143601517-143608759 processed_transcript
ENST00000474474 (ARHGAP15-004) 143228098-143435699 processed_transcript
ENST00000548242 (ARHGAP15-010) 143435266-143533317 processed_transcript
ENST00000548800 (ARHGAP15-009) 143435264-143437103 retained_intron
ENST00000548929 (ARHGAP15-011) 143435314-143487479 retained_intron
ENST00000549060 (ARHGAP15-014) 143706411-143768348 processed_transcript
ENST00000549436 (ARHGAP15-013) 143519278-143703960 retained_intron
ENST00000552289 (ARHGAP15-012) 143487363-143519485 retained_intron
ENST00000552641 (ARHGAP15-008) 143129413-143437357 retained_intron
ENSG00000121964 (GTDC1)
glycosyltransferase-like domain containing 1 		ENST00000241391 (GTDC1-201) 143946016-144211579 protein_coding
ENST00000344850 (GTDC1-202) 143946016-144295318 protein_coding
ENST00000392867 (GTDC1-002) 143946014-144237341 protein_coding
ENST00000392869 (GTDC1-001) 143938068-144235740 protein_coding
ENST00000392871 (GTDC1-008) 143946023-144211582 nonsense_mediated_decay
ENST00000409214 (GTDC1-006) 143945754-144294493 protein_coding
ENST00000409298 (GTDC1-007) 143946016-144235737 protein_coding
ENST00000415569 (GTDC1-005) 143946033-144235739 nonsense_mediated_decay
ENST00000417450 (GTDC1-016) 144145620-144319870 protein_coding
ENST00000429978 (GTDC1-015) 144178834-144332568 nonsense_mediated_decay
ENST00000437114 (GTDC1-011) 144141882-144235737 protein_coding
ENST00000463875 (GTDC1-004) 143946827-144332516 protein_coding
ENST00000467352 (GTDC1-017) 144210835-144319870 processed_transcript
ENST00000476958 (GTDC1-014) 144007334-144145905 processed_transcript
ENST00000482601 (GTDC1-013) 144127924-144178936 processed_transcript
ENST00000482961 (GTDC1-009) 143950945-143952053 processed_transcript
ENST00000484303 (GTDC1-012) 144178308-144235739 retained_intron
ENST00000491448 (GTDC1-003) 144005751-144235737 retained_intron
ENST00000542155 (GTDC1-203) 143946016-144332534 protein_coding
ENST00000618778 (GTDC1-204) 143946016-144177217 protein_coding
ENSG00000231758 (AC092652.1)
 ENST00000413315 (AC092652.1-001) 143640768-143656179 antisense
ENST00000548051 (AC092652.1-002) 143640756-143648885 antisense
ENSG00000257226 (CTD-2252P21.1)
 ENST00000548756 (CTD-2252P21.1-001) 143766620-143776073 antisense
ENSG00000257277 (RP11-434H14.1)
 ENST00000552220 (RP11-434H14.1-002) 143676165-143741294 antisense
ENST00000552418 (RP11-434H14.1-001) 143676319-143682939 antisense

Homo sapiens Ensembl (GRCh38)

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Structures from Ensembl
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Transcripts
Structures from Ensembl
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CIL_0008S0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs404 VISTA 10090 2:44272995-44874695
GeneTranscriptPositionBiotype
ENSMUSG00000036890 (Gtdc1)
glycosyltransferase-like domain containing 1 		ENSMUST00000049051 (Gtdc1-201) 44564415-44756437 protein_coding
ENSMUST00000100127 (Gtdc1-202) 44785490-44927236 protein_coding
ENSMUST00000112810 (Gtdc1-001) 44564412-44861622 protein_coding
ENSMUST00000129240 (Gtdc1-002) 44633129-44927264 processed_transcript
ENSMUST00000130991 (Gtdc1-008) 44575478-44927161 protein_coding
ENSMUST00000133442 (Gtdc1-006) 44791193-44927149 processed_transcript
ENSMUST00000134813 (Gtdc1-011) 44565133-44571347 processed_transcript
ENSMUST00000143333 (Gtdc1-010) 44570370-44571714 processed_transcript
ENSMUST00000143766 (Gtdc1-004) 44788728-44927234 processed_transcript
ENSMUST00000146694 (Gtdc1-007) 44591910-44862275 protein_coding
ENSMUST00000148279 (Gtdc1-003) 44635264-44927657 protein_coding
ENSMUST00000148786 (Gtdc1-009) 44751895-44825403 processed_transcript
ENSMUST00000154744 (Gtdc1-005) 44756268-44862275 protein_coding
ENSMUSG00000049744 (Arhgap15)
Rho GTPase activating protein 15 		ENSMUST00000055776 (Arhgap15-001) 43748870-44387623 protein_coding
ENSMUST00000112822 (Arhgap15-003) 43748834-44387619 nonsense_mediated_decay
ENSMUST00000112824 (Arhgap15-002) 43748824-44395953 protein_coding
ENSMUST00000128630 (Arhgap15-005) 44065041-44142456 processed_transcript
ENSMUST00000140528 (Arhgap15-004) 43748869-43894708 processed_transcript

Mus musculus Ensembl (GRCm38)

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Transcripts
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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S0_0001ENSG00000075884ENST00000295095ENST00000409869ENST00000419455ENST00000460776ENST00000469117ENST00000473426ENST00000474474ENST00000548242ENST00000548800ENST00000548929ENST00000549060ENST00000549436ENST00000552289ENST00000552641ENSG00000121964ENST00000241391ENST00000344850ENST00000392867ENST00000392869ENST00000392871ENST00000409214ENST00000409298ENST00000415569ENST00000417450ENST00000429978ENST00000437114ENST00000463875ENST00000467352ENST00000476958ENST00000482601ENST00000482961ENST00000484303ENST00000491448ENST00000542155ENST00000618778ENSG00000231758ENST00000413315ENST00000548051ENSG00000257226ENST00000548756ENSG00000257277ENST00000552220ENST00000552418CIL_0008S0_0002ENSMUSG00000036890ENSMUST00000049051ENSMUST00000100127ENSMUST00000112810ENSMUST00000129240ENSMUST00000130991ENSMUST00000133442ENSMUST00000134813ENSMUST00000143333ENSMUST00000143766ENSMUST00000146694ENSMUST00000148279ENSMUST00000148786ENSMUST00000154744ENSMUSG00000049744ENSMUST00000055776ENSMUST00000112822ENSMUST00000112824ENSMUST00000128630ENSMUST00000140528
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008S0_0001ENSG00000075884ENST00000295095ENST00000409869ENST00000460776ENST00000473426ENST00000548242ENST00000548929ENST00000549060ENST00000549436ENST00000552289ENSG00000121964ENST00000241391ENST00000344850ENST00000392867ENST00000392869ENST00000392871ENST00000409214ENST00000409298ENST00000417450ENST00000484303ENST00000491448ENST00000542155ENST00000618778ENSG00000231758ENST00000413315ENST00000548051ENSG00000257226ENST00000548756ENSG00000257277ENST00000552220ENST00000552418CIL_0008S0_0002ENSMUSG00000036890ENSMUST00000049051ENSMUST00000112810ENSMUST00000130991ENSMUST00000146694ENSMUST00000148279ENSMUST00000154744ENSMUSG00000049744ENSMUST00000055776ENSMUST00000112822ENSMUST00000112824ENSMUST00000128630ENSMUST00000140528
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000075884 ENST00000295095 1.317±0.00 4.393±0.00 0.429±0.00 0.366±0.16 3.708±0.00 2.859±0.00 0.862±0.00 0.306±0.00 0.326±0.00 8.266±0.00 N/A 0.939±0.13 0.729±0.32 N/A
ENST00000409869 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.039±0.00 N/A N/A 0.403±0.00
ENST00000419455 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460776 N/A N/A 0.692±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469117 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473426 0.049±0.00 0.965±0.00 N/A 0.021±0.00 0.260±0.24 0.150±0.05 0.086±0.04 0.032±0.00 0.046±0.00 0.656±0.57 N/A 0.190±0.19 0.021±0.00 0.015±0.00
ENST00000474474 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548242 N/A N/A N/A N/A N/A N/A N/A N/A 2.756±0.00 N/A 1.595±0.00 1.027±0.00 N/A N/A
ENST00000548800 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000548929 N/A N/A 1.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000549060 N/A N/A N/A 0.310±0.00 N/A N/A N/A N/A N/A N/A N/A 0.723±0.00 N/A 4.649±0.00
ENST00000549436 N/A N/A N/A 0.169±0.00 N/A N/A N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A
ENST00000552289 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 N/A N/A
ENST00000552641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000121964 ENST00000241391 N/A N/A N/A N/A N/A N/A N/A 1.782±0.00 0.587±0.00 N/A N/A 1.206±0.00 0.766±0.00 2.155±0.00
ENST00000344850 5.151±0.00 N/A 0.547±0.00 N/A 2.126±0.00 N/A 1.462±0.00 N/A 1.384±0.00 N/A N/A 2.431±2.19 1.897±0.41 2.610±0.00
ENST00000392867 N/A N/A N/A N/A N/A N/A 0.751±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000392869 N/A N/A 0.115±0.00 1.809±0.08 N/A N/A 0.454±0.00 N/A N/A 0.608±0.00 0.136±0.00 0.718±0.00 0.219±0.06 N/A
ENST00000392871 N/A 2.293±0.00 N/A N/A 3.730±0.00 1.923±0.00 2.060±1.24 N/A N/A 5.509±0.00 0.957±0.00 N/A 1.122±0.00 2.282±0.00
ENST00000409214 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.128±0.00 N/A N/A
ENST00000409298 N/A 1.985±0.00 N/A 6.553±0.00 3.096±0.96 1.626±0.27 N/A 1.395±0.76 1.423±0.65 2.376±0.00 0.987±0.00 1.759±0.00 1.388±0.53 3.279±0.39
ENST00000415569 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000417450 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.542±0.00 N/A N/A N/A
ENST00000429978 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000437114 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463875 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000467352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476958 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482601 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482961 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484303 N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.231±0.00 N/A N/A N/A N/A
ENST00000491448 N/A 1.362±0.00 2.083±0.00 N/A 2.181±0.00 2.759±0.00 N/A N/A N/A 2.446±0.00 N/A 0.330±0.00 N/A 1.426±0.00
ENST00000542155 2.420±0.00 1.359±0.00 N/A N/A N/A N/A N/A 1.228±0.00 0.669±0.00 N/A N/A N/A N/A 2.217±0.00
ENST00000618778 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.962±0.66 0.523±0.00 N/A
ENSG00000231758 ENST00000413315 N/A 0.071±0.00 N/A 0.183±0.00 N/A 0.066±0.00 N/A 0.047±0.00 N/A 0.411±0.00 N/A 0.420±0.00 N/A 0.172±0.00
ENST00000548051 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.116±0.00 N/A
ENSG00000257226 ENST00000548756 N/A N/A N/A N/A 0.117±0.00 N/A N/A N/A N/A 0.566±0.00 N/A 0.074±0.00 N/A 0.397±0.16
ENSG00000257277 ENST00000552220 0.037±0.00 0.131±0.00 0.089±0.00 0.205±0.00 0.506±0.35 0.475±0.34 0.120±0.00 0.109±0.00 0.335±0.00 0.308±0.00 N/A 0.040±0.01 N/A 0.092±0.06
ENST00000552418 N/A 0.127±0.00 N/A N/A 0.088±0.00 0.425±0.00 N/A N/A N/A N/A N/A 0.112±0.00 0.046±0.00 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000036890 ENSMUST00000049051 1.322±0.64 0.743±0.09 1.496±0.52 5.645±3.48 1.418±0.49 0.748±0.16 1.378±0.33 1.938±0.61 1.683±0.65 1.725±0.81 4.178±1.94 1.659±0.45 2.625±0.73 3.965±1.40
ENSMUST00000100127 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000112810 0.879±0.08 0.713±0.00 1.016±0.21 3.476±1.79 2.069±0.59 0.215±0.00 0.611±0.00 N/A 1.645±1.03 0.614±0.00 1.303±0.10 1.356±0.17 1.266±0.58 2.330±0.23
ENSMUST00000129240 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130991 1.680±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.206±0.21 N/A N/A
ENSMUST00000133442 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134813 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146694 N/A N/A N/A N/A 3.567±0.00 N/A N/A N/A N/A N/A N/A 2.055±0.00 N/A N/A
ENSMUST00000148279 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.859±0.00 N/A N/A N/A
ENSMUST00000148786 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154744 2.681±0.61 3.865±0.95 N/A 15.474±0.00 4.943±1.80 2.659±0.88 2.863±0.25 3.578±1.25 2.083±0.78 3.878±1.42 N/A 12.009±17.65 6.886±2.45 13.264±0.00
ENSMUSG00000049744 ENSMUST00000055776 0.442±0.19 0.220±0.13 0.926±0.24 0.230±0.12 1.974±0.88 0.332±0.13 0.344±0.19 0.649±0.25 1.247±1.21 1.395±0.56 0.431±0.12 0.584±0.42 0.138±0.13 0.407±0.16
ENSMUST00000112822 1.141±0.00 N/A 0.380±0.00 N/A 1.079±0.97 N/A N/A 0.459±0.18 0.880±0.33 0.343±0.00 N/A 0.328±0.00 0.088±0.00 N/A
ENSMUST00000112824 N/A N/A N/A N/A N/A N/A 0.020±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128630 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.059±0.65 0.070±0.00 0.995±0.00
ENSMUST00000140528 N/A 0.070±0.00 N/A N/A 0.374±0.10 N/A 0.009±0.00 N/A 0.028±0.00 N/A N/A N/A N/A 0.053±0.01

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