C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glycosyltransferase-like domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000112810 Gtdc1-001 ENSMUSG00000036890 10090 - 2:44564412-44861622 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000112810
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000112810 0.879±0.08 0.713±0.00 1.016±0.21 3.476±1.79 2.069±0.59 0.215±0.00 0.611±0.00 1.645±1.03 0.614±0.00 1.303±0.10 1.356±0.17 1.266±0.58 2.330±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006M8 CIL_0006M8_0002 CGP 2:43748824-44927657
CIL_0007L9 CIL_0007L9_0005 UCNEbase 2:43782078-47834434
CIL_0008S0 CIL_0008S0_0002 VISTA 2:44272995-44874695
CIL_0006M9 CIL_0006M9_0002 CGP 2:44564412-45117395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0009058 IEA biosynthetic process
GO:0016757 IEA transferase activity, transferring glycosyl groups

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000241391 GTDC1-201 protein_coding Homo_sapiens 0 1637
ENST00000344850 GTDC1-202 protein_coding Homo_sapiens 0 1923
ENST00000392867 GTDC1-002 protein_coding Homo_sapiens 0 1637
ENST00000392869 GTDC1-001 protein_coding Homo_sapiens 0 1938
ENST00000392871 GTDC1-008 nonsense_mediated_decay Homo_sapiens 0 1626
ENST00000409214 GTDC1-006 protein_coding Homo_sapiens 0 1938
ENST00000409298 GTDC1-007 protein_coding Homo_sapiens 0 1871
ENST00000415569 GTDC1-005 nonsense_mediated_decay Homo_sapiens 0 1908
ENST00000463875 GTDC1-004 protein_coding Homo_sapiens 0 1026
ENST00000476958 GTDC1-014 processed_transcript Homo_sapiens 0 483
ENST00000491448 GTDC1-003 retained_intron Homo_sapiens 0 654
ENST00000542155 GTDC1-203 protein_coding Homo_sapiens 0 1923
ENST00000618778 GTDC1-204 protein_coding Homo_sapiens 0 1923

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