C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037300 Ttc13 10090 - 8:124671335-124721983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041614 Ttc13-001 124671335-124721972 protein_coding
  ENSMUST00000117624 Ttc13-002 124671335-124721964 protein_coding
  ENSMUST00000118134 Ttc13-003 124671335-124721983 protein_coding
  ENSMUST00000126674 Ttc13-009 124673448-124674220 retained_intron
  ENSMUST00000127167 Ttc13-004 124707981-124721981 retained_intron
  ENSMUST00000128390 Ttc13-007 124679541-124682122 retained_intron
  ENSMUST00000130344 Ttc13-008 124673954-124675502 retained_intron
  ENSMUST00000131633 Ttc13-006 124679035-124682530 retained_intron
  ENSMUST00000140350 Ttc13-005 124674100-124678948 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041614ENSMUST00000117624ENSMUST00000118134ENSMUST00000140350
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041614 N/A 4.740±1.08 1.137±0.00 7.366±0.00 N/A 2.514±0.00 1.591±0.00 1.176±0.00 1.679±0.00 N/A N/A 3.446±0.32 2.908±1.29 N/A
ENSMUST00000117624 N/A 2.446±0.00 N/A 1.506±0.00 N/A 3.206±0.00 N/A 0.753±0.00 1.396±0.19 1.288±0.00 N/A 2.826±0.51 3.313±1.91 0.690±0.15
ENSMUST00000118134 5.040±0.00 6.664±1.49 2.084±0.00 3.876±1.76 4.773±1.61 5.149±1.08 1.148±0.18 2.109±0.27 3.261±1.56 3.386±0.13 2.195±0.54 4.902±2.11 6.120±3.69 1.437±1.04
ENSMUST00000140350 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_000613 CIL_000613_0002 CGP 8:124635766-124721983
CIL_000614 CIL_000614_0002 CGP 8:124671335-124734123

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063242 ttc13 tetratricopeptide repeat domain 13 protein_coding Danio_rerio
ENSG00000143643 TTC13 tetratricopeptide repeat domain 13 protein_coding Homo_sapiens

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