C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tetratricopeptide repeat domain 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118134 Ttc13-003 ENSMUSG00000037300 10090 - 8:124671335-124721983 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000118134
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000118134 5.040±0.00 6.664±1.49 2.084±0.00 3.876±1.76 4.773±1.61 5.149±1.08 1.148±0.18 2.109±0.27 3.261±1.56 3.386±0.13 2.195±0.54 4.902±2.11 6.120±3.69 1.437±1.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0002 VISTA 8:124343702-124945898
CIL_000613 CIL_000613_0002 CGP 8:124635766-124721983
CIL_000614 CIL_000614_0002 CGP 8:124671335-124734123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000366661 TTC13-001 protein_coding Homo_sapiens 0 1868
ENST00000366662 TTC13-002 protein_coding Homo_sapiens 0 2218
ENST00000466507 TTC13-004 nonsense_mediated_decay Homo_sapiens 0 316
ENST00000471302 TTC13-010 retained_intron Homo_sapiens 0 582
ENST00000481976 TTC13-005 nonsense_mediated_decay Homo_sapiens 0 514
ENST00000486879 TTC13-006 protein_coding Homo_sapiens 0 316
ENST00000522399 TTC13-007 protein_coding Homo_sapiens 0 248
ENST00000522821 TTC13-008 protein_coding Homo_sapiens 0 370

Loading