C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tetratricopeptide repeat domain 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000143643 TTC13 9606 - 1:230906243-230978875 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000366661 TTC13-001 230906243-230978838 protein_coding
  ENST00000366662 TTC13-002 230906243-230978859 protein_coding
  ENST00000466507 TTC13-004 230940509-230978835 nonsense_mediated_decay
  ENST00000471302 TTC13-010 230911377-230921506 retained_intron
  ENST00000481976 TTC13-005 230931418-230978875 nonsense_mediated_decay
  ENST00000486879 TTC13-006 230920303-230924863 protein_coding
  ENST00000519379 TTC13-009 230933816-230936637 retained_intron
  ENST00000522399 TTC13-007 230939458-230978861 protein_coding
  ENST00000522821 TTC13-008 230933783-230978796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000366661ENST00000366662ENST00000471302ENST00000522821
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000366661 1.249±0.00 2.308±0.00 N/A 1.914±0.00 2.792±0.00 1.034±0.65 0.814±0.53 0.864±0.04 1.819±0.00 3.408±2.88 1.495±0.79 1.799±0.37 0.645±0.12
ENST00000366662 0.383±0.00 N/A 0.178±0.00 1.381±0.00 0.684±0.00 N/A 0.664±0.06 N/A N/A N/A N/A 0.309±0.00 0.324±0.00
ENST00000471302 N/A N/A 1.080±0.00 N/A N/A N/A N/A N/A N/A N/A 2.427±0.00 1.297±0.00 N/A
ENST00000522821 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.948±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007WK CIL_0007WK_0001 VISTA 1:230548777-231152235
CIL_000613 CIL_000613_0001 CGP 1:230837119-230978875
CIL_000614 CIL_000614_0001 CGP 1:230906243-231000595

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063242 ttc13 tetratricopeptide repeat domain 13 protein_coding Danio_rerio
ENSMUSG00000037300 Ttc13 tetratricopeptide repeat domain 13 protein_coding Mus_musculus

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