C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000614_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000143643-ENSG00000173409 CGP 9606 1:230906243-231000595
GeneTranscriptPositionBiotype
ENSG00000143643 (TTC13)
tetratricopeptide repeat domain 13 		ENST00000366661 (TTC13-001) 230906243-230978838 protein_coding
ENST00000366662 (TTC13-002) 230906243-230978859 protein_coding
ENST00000466507 (TTC13-004) 230940509-230978835 nonsense_mediated_decay
ENST00000471302 (TTC13-010) 230911377-230921506 retained_intron
ENST00000481976 (TTC13-005) 230931418-230978875 nonsense_mediated_decay
ENST00000486879 (TTC13-006) 230920303-230924863 protein_coding
ENST00000519379 (TTC13-009) 230933816-230936637 retained_intron
ENST00000522399 (TTC13-007) 230939458-230978861 protein_coding
ENST00000522821 (TTC13-008) 230933783-230978796 protein_coding
ENSG00000173409 (ARV1)
ARV1 homolog (S. cerevisiae) 		ENST00000310256 (ARV1-001) 230979049-231000595 protein_coding
ENST00000366658 (ARV1-003) 230979094-231000595 protein_coding
ENST00000435927 (ARV1-005) 230979146-230997267 protein_coding
ENST00000450711 (ARV1-007) 230979116-230999803 protein_coding
ENST00000459891 (ARV1-006) 230995760-231000595 nonsense_mediated_decay
ENST00000480519 (ARV1-002) 230979111-230999867 nonsense_mediated_decay
ENST00000497753 (ARV1-004) 230978981-230997154 processed_transcript
ENSG00000252131 (AL844165.1)
 ENST00000516322 (AL844165.1-201) 230988989-230989123 miRNA
CIL_000614_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037300-ENSMUSG00000031982 CGP 10090 8:124671335-124734123
GeneTranscriptPositionBiotype
ENSMUSG00000031982 (Arv1)
ARV1 homolog (yeast) 		ENSMUST00000034463 (Arv1-201) 124722139-124734123 protein_coding
ENSMUSG00000037300 (Ttc13)
tetratricopeptide repeat domain 13 		ENSMUST00000041614 (Ttc13-001) 124671335-124721972 protein_coding
ENSMUST00000117624 (Ttc13-002) 124671335-124721964 protein_coding
ENSMUST00000118134 (Ttc13-003) 124671335-124721983 protein_coding
ENSMUST00000126674 (Ttc13-009) 124673448-124674220 retained_intron
ENSMUST00000127167 (Ttc13-004) 124707981-124721981 retained_intron
ENSMUST00000128390 (Ttc13-007) 124679541-124682122 retained_intron
ENSMUST00000130344 (Ttc13-008) 124673954-124675502 retained_intron
ENSMUST00000131633 (Ttc13-006) 124679035-124682530 retained_intron
ENSMUST00000140350 (Ttc13-005) 124674100-124678948 retained_intron

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000614_0001ENSG00000143643ENST00000366661ENST00000366662ENST00000466507ENST00000471302ENST00000481976ENST00000486879ENST00000519379ENST00000522399ENST00000522821ENSG00000173409ENST00000310256ENST00000366658ENST00000435927ENST00000450711ENST00000459891ENST00000480519ENST00000497753ENSG00000252131ENST00000516322CIL_000614_0002ENSMUSG00000031982ENSMUST00000034463ENSMUSG00000037300ENSMUST00000041614ENSMUST00000117624ENSMUST00000118134ENSMUST00000126674ENSMUST00000127167ENSMUST00000128390ENSMUST00000130344ENSMUST00000131633ENSMUST00000140350
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000614_0001ENSG00000143643ENST00000366661ENST00000366662ENST00000471302ENST00000522821ENSG00000173409ENST00000310256ENST00000366658ENST00000435927ENST00000459891ENST00000480519ENSG00000252131ENST00000516322CIL_000614_0002ENSMUSG00000031982ENSMUST00000034463ENSMUSG00000037300ENSMUST00000041614ENSMUST00000117624ENSMUST00000118134ENSMUST00000140350
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000143643 ENST00000366661 1.249±0.00 2.308±0.00 N/A 1.914±0.00 2.792±0.00 N/A 1.034±0.65 0.814±0.53 0.864±0.04 1.819±0.00 3.408±2.88 1.495±0.79 1.799±0.37 0.645±0.12
ENST00000366662 0.383±0.00 N/A 0.178±0.00 1.381±0.00 0.684±0.00 N/A N/A 0.664±0.06 N/A N/A N/A N/A 0.309±0.00 0.324±0.00
ENST00000466507 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471302 N/A N/A 1.080±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 2.427±0.00 1.297±0.00 N/A
ENST00000481976 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486879 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519379 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522399 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522821 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.948±0.00 N/A N/A N/A
ENSG00000173409 ENST00000310256 2.886±0.00 5.844±0.00 0.535±0.00 6.996±2.43 4.564±0.00 0.819±0.00 4.739±2.39 7.509±0.00 2.597±0.59 3.174±0.00 0.903±0.00 4.807±2.35 3.225±0.53 15.007±1.16
ENST00000366658 1.525±0.00 N/A 1.696±0.00 2.830±0.11 3.961±0.00 4.746±0.31 0.535±0.00 4.514±1.06 4.184±0.00 2.823±0.00 2.025±0.00 N/A 1.476±0.00 N/A
ENST00000435927 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.663±0.00 1.307±0.00 N/A N/A N/A
ENST00000450711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000459891 N/A 1.789±0.00 N/A N/A N/A N/A N/A N/A 0.383±0.00 N/A N/A N/A N/A N/A
ENST00000480519 0.739±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497753 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000252131 ENST00000516322 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.213±0.00 N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031982 ENSMUST00000034463 N/A N/A 2.677±0.00 1.257±0.00 N/A N/A N/A N/A 1.913±0.95 N/A 0.494±0.12 2.688±0.00 2.693±1.42 2.699±1.18
ENSMUSG00000037300 ENSMUST00000041614 N/A 4.740±1.08 1.137±0.00 7.366±0.00 N/A 2.514±0.00 1.591±0.00 1.176±0.00 1.679±0.00 N/A N/A 3.446±0.32 2.908±1.29 N/A
ENSMUST00000117624 N/A 2.446±0.00 N/A 1.506±0.00 N/A 3.206±0.00 N/A 0.753±0.00 1.396±0.19 1.288±0.00 N/A 2.826±0.51 3.313±1.91 0.690±0.15
ENSMUST00000118134 5.040±0.00 6.664±1.49 2.084±0.00 3.876±1.76 4.773±1.61 5.149±1.08 1.148±0.18 2.109±0.27 3.261±1.56 3.386±0.13 2.195±0.54 4.902±2.11 6.120±3.69 1.437±1.04
ENSMUST00000126674 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000127167 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130344 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131633 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140350 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.926±0.00 N/A N/A N/A N/A

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