C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: bestrophin 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037418 Best1 10090 - 19:9985174-10001633 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000117346 Best1-001 9985174-10001633 protein_coding
  ENSMUST00000144273 Best1-002 9990548-9992915 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000117346ENSMUST00000144273
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000117346 1.020±0.00 0.228±0.07 1.721±0.00 0.311±0.21 0.806±0.02 0.241±0.15 0.108±0.03 0.170±0.04 0.046±0.02 0.995±0.00 0.064±0.01 0.654±0.33 0.077±0.05 140.445±52.82
ENSMUST00000144273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 0.330±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000055 CIL_000055_0002 CGP 19:9982703-10001633
CIL_000056 CIL_000056_0002 CGP 19:9985174-10038380

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005254 IEA chloride channel activity
GO:0006821 IEA chloride transport
GO:0016323 ISS basolateral plasma membrane
GO:0030321 IEP transepithelial chloride transport
GO:0034707 IEA chloride channel complex
GO:0050908 IMP detection of light stimulus involved in visual perception
GO:0051924 IMP regulation of calcium ion transport
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078331 best1 bestrophin 1 protein_coding Danio_rerio
ENSG00000167995 BEST1 bestrophin 1 protein_coding Homo_sapiens

Loading