C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_000056_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000078331-ENSDARG00000007711 CGP 7955 25:3036079-3083965
GeneTranscriptPositionBiotype
ENSDARG00000007711 (RAB3IL1)
RAB3A interacting protein (rabin3)-like 1 		ENSDART00000022506 (RAB3IL1-201) 3065866-3083965 protein_coding
ENSDARG00000078331 (best1)
bestrophin 1 		ENSDART00000110077 (best1-201) 3036079-3054253 protein_coding
ENSDART00000149342 (best1-001) 3036635-3045622 protein_coding
CIL_000056_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037418-ENSMUSG00000024663 CGP 10090 19:9985174-10038380
GeneTranscriptPositionBiotype
ENSMUSG00000024663 (Rab3il1)
RAB3A interacting protein (rabin3)-like 1 		ENSMUST00000113161 (Rab3il1-004) 10018193-10035456 protein_coding
ENSMUST00000117641 (Rab3il1-003) 10018194-10035455 protein_coding
ENSMUST00000121418 (Rab3il1-001) 10001669-10035586 protein_coding
ENSMUST00000129882 (Rab3il1-008) 10031670-10033810 retained_intron
ENSMUST00000131407 (Rab3il1-007) 10018265-10028308 protein_coding
ENSMUST00000137637 (Rab3il1-005) 10015016-10027576 protein_coding
ENSMUST00000144788 (Rab3il1-002) 10018194-10038380 nonsense_mediated_decay
ENSMUST00000149967 (Rab3il1-006) 10015044-10027477 protein_coding
ENSMUSG00000037418 (Best1)
bestrophin 1 		ENSMUST00000117346 (Best1-001) 9985174-10001633 protein_coding
ENSMUST00000144273 (Best1-002) 9990548-9992915 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000056_0001ENSDARG00000007711ENSDART00000022506ENSDARG00000078331ENSDART00000110077ENSDART00000149342CIL_000056_0002ENSMUSG00000024663ENSMUST00000113161ENSMUST00000117641ENSMUST00000121418ENSMUST00000129882ENSMUST00000131407ENSMUST00000137637ENSMUST00000144788ENSMUST00000149967ENSMUSG00000037418ENSMUST00000117346ENSMUST00000144273
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000056_0001ENSDARG00000007711ENSDART00000022506ENSDARG00000078331ENSDART00000110077ENSDART00000149342CIL_000056_0002ENSMUSG00000024663ENSMUST00000113161ENSMUST00000117641ENSMUST00000121418ENSMUST00000131407ENSMUST00000144788ENSMUST00000149967ENSMUSG00000037418ENSMUST00000117346ENSMUST00000144273
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000007711 ENSDART00000022506 N/A N/A N/A 0.846±0.00 N/A N/A 3.286±0.00 N/A 0.032±0.00 N/A N/A N/A N/A N/A
ENSDARG00000078331 ENSDART00000110077 N/A N/A N/A 0.149±0.06 N/A N/A 0.071±0.02 0.099±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000149342 N/A N/A N/A N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024663 ENSMUST00000113161 8.093±0.68 1.560±0.48 5.343±0.00 3.121±0.54 9.462±1.07 2.405±0.60 2.048±0.89 6.881±1.57 18.510±19.78 2.609±0.99 1.117±0.46 5.657±2.36 6.484±4.72 48.640±13.33
ENSMUST00000117641 6.885±2.09 3.917±0.39 2.739±0.00 2.111±0.26 10.513±1.88 2.329±0.41 1.749±0.21 7.002±2.44 17.301±15.65 2.433±0.60 0.778±0.32 7.060±2.65 3.284±1.83 N/A
ENSMUST00000121418 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 83.514±25.46
ENSMUST00000129882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131407 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 111.669±0.00
ENSMUST00000137637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144788 N/A N/A N/A 0.965±0.12 2.651±0.00 0.959±0.00 0.676±0.00 N/A 0.192±0.00 0.755±0.00 0.370±0.07 2.600±0.76 0.514±0.00 N/A
ENSMUST00000149967 N/A N/A N/A N/A N/A N/A N/A 14.812±4.76 37.719±24.98 N/A N/A N/A 12.386±0.00 N/A
ENSMUSG00000037418 ENSMUST00000117346 1.020±0.00 0.228±0.07 1.721±0.00 0.311±0.21 0.806±0.02 0.241±0.15 0.108±0.03 0.170±0.04 0.046±0.02 0.995±0.00 0.064±0.01 0.654±0.33 0.077±0.05 140.445±52.82
ENSMUST00000144273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.261±0.00 N/A 0.330±0.00 N/A

Loading