C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEP domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037426 Depdc5 10090 + 5:32863701-32994231 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000049780 Depdc5-006 32863777-32956298 protein_coding
  ENSMUST00000087897 Depdc5-001 32863721-32994231 protein_coding
  ENSMUST00000118698 Depdc5-007 32863706-32895934 protein_coding
  ENSMUST00000119705 Depdc5-002 32863734-32991668 protein_coding
  ENSMUST00000120902 Depdc5-014 32864587-32991661 protein_coding
  ENSMUST00000124780 Depdc5-005 32924206-32991654 nonsense_mediated_decay
  ENSMUST00000125574 Depdc5-009 32863772-32878677 protein_coding
  ENSMUST00000127560 Depdc5-012 32967719-32974176 retained_intron
  ENSMUST00000130461 Depdc5-011 32944113-32964723 protein_coding
  ENSMUST00000137169 Depdc5-015 32924304-32991661 protein_coding
  ENSMUST00000139098 Depdc5-004 32863760-32906757 retained_intron
  ENSMUST00000139463 Depdc5-003 32863770-32887667 retained_intron
  ENSMUST00000141812 Depdc5-010 32943818-32945032 retained_intron
  ENSMUST00000149350 Depdc5-013 32863701-32887048 protein_coding
  ENSMUST00000150130 Depdc5-008 32863713-32868010 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000087897ENSMUST00000119705ENSMUST00000120902ENSMUST00000124780ENSMUST00000137169
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000087897 0.735±0.24 0.682±0.10 0.469±0.02 1.778±0.06 0.746±0.10 0.813±0.10 0.525±0.04 0.741±0.15 0.619±0.14 0.928±0.06 0.337±0.07 1.094±0.23 0.454±0.05 1.787±0.63
ENSMUST00000119705 N/A N/A 0.507±0.00 3.522±0.77 N/A N/A 2.194±0.44 0.485±0.00 0.771±0.11 N/A 0.973±0.45 1.147±0.00 1.680±0.46 2.135±0.71
ENSMUST00000120902 4.279±1.10 5.344±0.42 2.060±0.03 2.423±0.00 4.355±0.83 4.872±1.21 0.833±0.33 3.638±0.63 2.617±0.49 5.617±0.39 0.798±0.29 7.163±1.24 3.415±1.67 1.599±0.63
ENSMUST00000124780 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.437±0.00 N/A N/A N/A
ENSMUST00000137169 1.284±0.00 N/A 1.152±0.13 3.393±0.99 1.665±0.00 N/A N/A 1.051±0.01 1.133±0.00 N/A 0.678±0.17 2.234±0.00 1.395±0.53 2.252±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0002 CGP 5:32789218-32994231
CIL_00032D CIL_00032D_0002 CGP 5:32863701-33027966

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005765 IEA lysosomal membrane
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078105 depdc5 DEP domain containing 5 protein_coding Danio_rerio
ENSG00000100150 DEPDC5 DEP domain containing 5 protein_coding Homo_sapiens

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