C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120902 Depdc5-014 ENSMUSG00000037426 10090 + 5:32864587-32991661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120902 4.279±1.10 5.344±0.42 2.060±0.03 2.423±0.00 4.355±0.83 4.872±1.21 0.833±0.33 3.638±0.63 2.617±0.49 5.617±0.39 0.798±0.29 7.163±1.24 3.415±1.67 1.599±0.63

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0002 CGP 5:32789218-32994231
CIL_00032D CIL_00032D_0002 CGP 5:32863701-33027966

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005829 IDA cytosol
GO:0008150 ND biological_process
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048471 IDA perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111088 depdc5-201 protein_coding Danio_rerio 0 459
ENSDART00000134059 depdc5-001 protein_coding Danio_rerio 0 448
ENST00000382111 DEPDC5-004 protein_coding Homo_sapiens 0 4063
ENST00000382112 DEPDC5-006 protein_coding Homo_sapiens 0 4204
ENST00000400242 DEPDC5-002 protein_coding Homo_sapiens 0 2388
ENST00000400246 DEPDC5-201 protein_coding Homo_sapiens 0 4063
ENST00000400248 DEPDC5-001 protein_coding Homo_sapiens 0 6093
ENST00000400249 DEPDC5-202 protein_coding Homo_sapiens 0 6093
ENST00000433147 DEPDC5-005 protein_coding Homo_sapiens 0 3398
ENST00000437411 DEPDC5-012 protein_coding Homo_sapiens 0 233
ENST00000448753 DEPDC5-003 nonsense_mediated_decay Homo_sapiens 0 1386
ENST00000456178 DEPDC5-014 nonsense_mediated_decay Homo_sapiens 0 595
ENST00000458532 DEPDC5-007 protein_coding Homo_sapiens 0 261
ENST00000462414 DEPDC5-015 processed_transcript Homo_sapiens 4e-31 137
ENST00000469969 DEPDC5-013 retained_intron Homo_sapiens 5e-29 132
ENST00000469974 DEPDC5-008 retained_intron Homo_sapiens 0 560
ENST00000471914 DEPDC5-016 retained_intron Homo_sapiens 0 665
ENST00000473802 DEPDC5-009 retained_intron Homo_sapiens 0 675
ENST00000479261 DEPDC5-018 retained_intron Homo_sapiens 0 560
ENST00000490731 DEPDC5-017 retained_intron Homo_sapiens 0 556
ENST00000494060 DEPDC5-019 processed_transcript Homo_sapiens 0 488
ENST00000494065 DEPDC5-010 retained_intron Homo_sapiens 0 226
ENST00000535622 DEPDC5-203 protein_coding Homo_sapiens 0 3094

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