C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DEP domain containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000100150 DEPDC5 9606 + 22:31753951-31907034 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000382111 DEPDC5-004 31754862-31906898 protein_coding
  ENST00000382112 DEPDC5-006 31754852-31907005 protein_coding
  ENST00000400242 DEPDC5-002 31754069-31815988 protein_coding
  ENST00000400246 DEPDC5-201 31754023-31907034 protein_coding
  ENST00000400248 DEPDC5-001 31754863-31907026 protein_coding
  ENST00000400249 DEPDC5-202 31754023-31907034 protein_coding
  ENST00000433147 DEPDC5-005 31819164-31907009 protein_coding
  ENST00000437411 DEPDC5-012 31753958-31758624 protein_coding
  ENST00000448753 DEPDC5-003 31819066-31906998 nonsense_mediated_decay
  ENST00000456178 DEPDC5-014 31753979-31778137 nonsense_mediated_decay
  ENST00000458532 DEPDC5-007 31768852-31784258 protein_coding
  ENST00000462414 DEPDC5-015 31833849-31838721 processed_transcript
  ENST00000469969 DEPDC5-013 31753970-31755511 retained_intron
  ENST00000469974 DEPDC5-008 31784825-31802738 retained_intron
  ENST00000471914 DEPDC5-016 31833866-31843662 retained_intron
  ENST00000473802 DEPDC5-009 31792687-31804219 retained_intron
  ENST00000479261 DEPDC5-018 31873974-31879696 retained_intron
  ENST00000490731 DEPDC5-017 31836848-31843659 retained_intron
  ENST00000494060 DEPDC5-019 31846939-31875443 processed_transcript
  ENST00000494065 DEPDC5-010 31833918-31837322 retained_intron
  ENST00000497340 DEPDC5-011 31897635-31907012 processed_transcript
  ENST00000535622 DEPDC5-203 31753951-31907034 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000382111ENST00000382112ENST00000400242ENST00000400246ENST00000400248ENST00000400249ENST00000433147ENST00000448753ENST00000535622
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000382111 N/A N/A N/A 1.946±0.00 0.415±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.311±0.00
ENST00000382112 N/A N/A N/A 1.077±0.00 N/A N/A N/A N/A N/A 0.356±0.00 N/A N/A N/A 1.610±0.00
ENST00000400242 N/A N/A N/A N/A N/A 1.866±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000400246 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.185±0.00 N/A 0.319±0.00 N/A
ENST00000400248 1.137±0.00 0.432±0.00 N/A N/A 0.426±0.00 N/A N/A 1.367±0.00 N/A N/A N/A 1.138±0.47 0.704±0.17 1.697±0.00
ENST00000400249 N/A N/A N/A N/A 0.257±0.00 N/A 0.604±0.46 N/A 0.602±0.00 N/A 1.161±0.00 1.588±0.28 0.717±0.00 N/A
ENST00000433147 0.715±0.00 1.952±0.00 N/A N/A N/A N/A 0.150±0.00 0.545±0.00 0.769±0.00 0.608±0.00 N/A N/A 0.752±0.24 1.406±0.00
ENST00000448753 N/A N/A 0.354±0.00 N/A N/A N/A 0.526±0.00 1.214±0.00 N/A N/A N/A N/A N/A 1.749±0.00
ENST00000535622 0.421±0.00 0.724±0.00 N/A N/A 0.294±0.00 0.937±0.04 0.078±0.00 N/A N/A 0.475±0.00 N/A 0.982±0.00 1.339±0.00 0.937±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0001 CGP 22:31676256-31907034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005765 IDA lysosomal membrane
GO:0005829 ISS cytosol
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0048471 ISS perinuclear region of cytoplasm

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078105 depdc5 DEP domain containing 5 protein_coding Danio_rerio
ENSMUSG00000037426 Depdc5 DEP domain containing 5 protein_coding Mus_musculus

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