C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DEP domain containing 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000137169 Depdc5-015 ENSMUSG00000037426 10090 + 5:32924304-32991661 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000137169
Transcript ID Adipose Bladder Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000137169 1.284±0.00 1.152±0.13 3.393±0.99 1.665±0.00 1.051±0.01 1.133±0.00 0.678±0.17 2.234±0.00 1.395±0.53 2.252±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002NJ CIL_0002NJ_0002 CGP 5:32789218-32994231
CIL_00032D CIL_00032D_0002 CGP 5:32863701-33027966

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000111088 depdc5-201 protein_coding Danio_rerio 0 459
ENSDART00000134059 depdc5-001 protein_coding Danio_rerio 0 448
ENST00000382111 DEPDC5-004 protein_coding Homo_sapiens 0 1701
ENST00000382112 DEPDC5-006 protein_coding Homo_sapiens 0 1893
ENST00000400246 DEPDC5-201 protein_coding Homo_sapiens 0 1893
ENST00000400248 DEPDC5-001 protein_coding Homo_sapiens 0 3398
ENST00000400249 DEPDC5-202 protein_coding Homo_sapiens 0 3398
ENST00000433147 DEPDC5-005 protein_coding Homo_sapiens 0 3589
ENST00000448753 DEPDC5-003 nonsense_mediated_decay Homo_sapiens 0 1386
ENST00000462414 DEPDC5-015 processed_transcript Homo_sapiens 4e-31 137
ENST00000471914 DEPDC5-016 retained_intron Homo_sapiens 0 562
ENST00000479261 DEPDC5-018 retained_intron Homo_sapiens 0 560
ENST00000490731 DEPDC5-017 retained_intron Homo_sapiens 0 606
ENST00000494060 DEPDC5-019 processed_transcript Homo_sapiens 0 488
ENST00000494065 DEPDC5-010 retained_intron Homo_sapiens 0 375
ENST00000535622 DEPDC5-203 protein_coding Homo_sapiens 0 3245

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