C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: claudin 11
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037625 Cldn11 10090 + 3:31149946-31164324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000046174 Cldn11-001 31149946-31164324 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000046174
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000046174 0.395±0.13 8.666±1.80 0.601±0.12 16.377±8.07 4.422±2.15 0.453±0.13 0.334±0.18 2.277±0.91 0.075±0.03 0.610±0.08 0.065±0.03 9.433±4.52 1.025±0.89 44.678±19.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z6 CIL_0002Z6_0002 CGP 3:31095058-31164324
CIL_0002Z5 CIL_0002Z5_0002 CGP 3:31149946-31310378

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005515 IPI protein binding
GO:0005887 TAS integral component of plasma membrane
GO:0005923 ISS tight junction
GO:0007155 IMP cell adhesion
GO:0007283 IMP spermatogenesis
GO:0008366 IMP axon ensheathment
GO:0016338 ISS calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules
GO:0042802 ISS identical protein binding
GO:0045178 IDA basal part of cell
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020031 cldn11a claudin 11a protein_coding Danio_rerio
ENSDARG00000030723 cldn11b claudin 11b protein_coding Danio_rerio
ENSG00000013297 CLDN11 claudin 11 protein_coding Homo_sapiens

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