C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Z5_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000013297-ENSG00000013297 CGP 9606 3:170418865-170860380
GeneTranscriptPositionBiotype
ENSG00000013293 (SLC7A14)
solute carrier family 7, member 14 		ENST00000231706 (SLC7A14-001) 170459584-170586074 protein_coding
ENST00000466168 (SLC7A14-002) 170570090-170586027 processed_transcript
ENSG00000013297 (CLDN11)
claudin 11 		ENST00000064724 (CLDN11-001) 170418865-170434099 protein_coding
ENST00000468358 (CLDN11-006) 170421240-170433426 processed_transcript
ENST00000471373 (CLDN11-007) 170421245-170503009 processed_transcript
ENST00000477531 (CLDN11-008) 170421280-170437715 processed_transcript
ENST00000480067 (CLDN11-010) 170467282-170755208 processed_transcript
ENST00000486429 (CLDN11-005) 170418875-170423742 retained_intron
ENST00000486975 (CLDN11-002) 170418868-170860380 protein_coding
ENST00000488989 (CLDN11-009) 170437465-170454733 processed_transcript
ENST00000489485 (CLDN11-004) 170421218-170434092 processed_transcript
ENSG00000213174 (RP11-373E16.1)
 ENST00000398900 (RP11-373E16.1-001) 170653846-170654259 processed_pseudogene
ENSG00000239739 (RP11-373E16.4)
 ENST00000473110 (RP11-373E16.4-001) 170740351-170741365 lincRNA
ENSG00000241416 (KRT8P13)
keratin 8 pseudogene 13 		ENST00000463294 (KRT8P13-001) 170495627-170496636 processed_pseudogene
ENSG00000244738 (RP11-373E16.3)
 ENST00000497988 (RP11-373E16.3-001) 170656562-170662123 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_0002Z5_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037625-ENSMUSG00000069072 CGP 10090 3:31149946-31310378
GeneTranscriptPositionBiotype
ENSMUSG00000037625 (Cldn11)
claudin 11 		ENSMUST00000046174 (Cldn11-001) 31149946-31164324 protein_coding
ENSMUSG00000069072 (Slc7a14)
solute carrier family 7 (cationic amino acid transporter, y+ system), member 14 		ENSMUST00000091259 (Slc7a14-001) 31202910-31310378 protein_coding
ENSMUST00000108245 (Slc7a14-002) 31222720-31258394 protein_coding
ENSMUSG00000085953 (Gm15496)
predicted gene 15496 		ENSMUST00000129578 (Gm15496-001) 31285587-31316891 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z5_0001ENSG00000013293ENST00000231706ENST00000466168ENSG00000013297ENST00000064724ENST00000468358ENST00000471373ENST00000477531ENST00000480067ENST00000486429ENST00000486975ENST00000488989ENST00000489485ENSG00000213174ENST00000398900ENSG00000239739ENST00000473110ENSG00000241416ENST00000463294ENSG00000244738ENST00000497988CIL_0002Z5_0002ENSMUSG00000037625ENSMUST00000046174ENSMUSG00000069072ENSMUST00000091259ENSMUST00000108245ENSMUSG00000085953ENSMUST00000129578
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Z5_0001ENSG00000013293ENST00000231706ENSG00000013297ENST00000064724ENST00000477531ENST00000486975ENST00000489485ENSG00000213174ENST00000398900ENSG00000239739ENST00000473110ENSG00000241416ENST00000463294ENSG00000244738ENST00000497988CIL_0002Z5_0002ENSMUSG00000037625ENSMUST00000046174ENSMUSG00000069072ENSMUST00000091259ENSMUST00000108245ENSMUSG00000085953ENSMUST00000129578
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013293 ENST00000231706 N/A N/A N/A 6.821±1.03 0.258±0.00 0.368±0.23 0.011±0.00 0.170±0.00 N/A 0.119±0.00 N/A N/A N/A N/A
ENST00000466168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000013297 ENST00000064724 28.923±0.00 2.817±0.00 N/A 112.857±0.00 2.805±0.00 9.258±0.00 1.678±0.00 3.390±0.00 1.379±0.00 9.569±0.00 N/A 24.603±14.93 1.966±1.05 97.302±35.74
ENST00000468358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477531 N/A N/A N/A N/A N/A N/A 0.205±0.00 N/A 1.294±0.00 N/A N/A N/A N/A N/A
ENST00000480067 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486429 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486975 N/A N/A N/A N/A N/A 0.279±0.00 N/A 0.507±0.00 0.529±0.00 N/A N/A 2.565±0.00 0.754±0.00 N/A
ENST00000488989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489485 N/A N/A 0.529±0.00 11.319±0.00 1.325±0.00 0.447±0.00 0.259±0.00 0.257±0.00 1.148±0.00 1.116±0.00 0.826±0.00 12.914±12.48 3.069±0.23 23.301±0.00
ENSG00000213174 ENST00000398900 0.063±0.00 0.140±0.00 N/A N/A 0.077±0.00 N/A N/A N/A N/A N/A 0.060±0.00 N/A N/A 0.147±0.02
ENSG00000239739 ENST00000473110 N/A N/A 1.827±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A 0.071±0.00
ENSG00000241416 ENST00000463294 0.171±0.00 0.021±0.00 N/A 0.534±0.44 N/A 0.063±0.00 0.048±0.03 0.035±0.01 0.040±0.00 0.115±0.00 N/A 0.337±0.18 0.313±0.00 1.341±0.08
ENSG00000244738 ENST00000497988 0.030±0.00 0.037±0.00 0.093±0.00 0.142±0.00 0.097±0.07 0.013±0.00 0.055±0.00 N/A 0.086±0.00 0.018±0.00 N/A 0.020±0.02 0.012±0.00 0.045±0.03
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037625 ENSMUST00000046174 0.395±0.13 8.666±1.80 0.601±0.12 16.377±8.07 4.422±2.15 0.453±0.13 0.334±0.18 2.277±0.91 0.075±0.03 0.610±0.08 0.065±0.03 9.433±4.52 1.025±0.89 44.678±19.87
ENSMUSG00000069072 ENSMUST00000091259 0.041±0.02 0.777±0.13 N/A 4.136±3.38 0.038±0.03 0.369±0.09 0.076±0.02 0.106±0.02 0.033±0.01 0.051±0.01 0.052±0.02 0.084±0.08 0.129±0.05 0.282±0.00
ENSMUST00000108245 N/A 0.310±0.08 N/A N/A N/A 0.263±0.00 N/A N/A N/A N/A N/A N/A N/A 0.979±0.44
ENSMUSG00000085953 ENSMUST00000129578 N/A 0.120±0.02 N/A 0.050±0.00 N/A N/A N/A N/A N/A N/A N/A 0.076±0.03 0.013±0.00 0.082±0.02

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