C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037716 Ccdc33 10090 - 9:58028677-58118823 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042205 Ccdc33-005 58028677-58102297 protein_coding
  ENSMUST00000098681 Ccdc33-004 58111789-58118807 protein_coding
  ENSMUST00000098682 Ccdc33-001 58028678-58118823 protein_coding
  ENSMUST00000119665 Ccdc33-007 58028682-58102225 protein_coding
  ENSMUST00000123746 Ccdc33-003 58086324-58102297 retained_intron
  ENSMUST00000143797 Ccdc33-009 58033232-58042036 processed_transcript
  ENSMUST00000144887 Ccdc33-008 58028719-58030976 retained_intron
  ENSMUST00000146741 Ccdc33-010 58067503-58114360 processed_transcript
  ENSMUST00000151404 Ccdc33-006 58077013-58082069 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042205ENSMUST00000098681ENSMUST00000098682ENSMUST00000119665ENSMUST00000123746ENSMUST00000143797ENSMUST00000144887ENSMUST00000146741ENSMUST00000151404
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042205 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A 0.643±0.00 32.822±10.71
ENSMUST00000098681 0.064±0.05 N/A N/A N/A N/A 0.100±0.05 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098682 0.040±0.03 0.050±0.03 0.023±0.00 N/A 0.023±0.00 N/A 0.056±0.00 0.032±0.00 N/A 0.499±0.19 0.008±0.00 1.751±0.47 N/A N/A
ENSMUST00000119665 0.031±0.02 0.031±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A 4.017±0.93 0.067±0.00 18.714±11.21
ENSMUST00000123746 N/A N/A N/A N/A 0.165±0.08 N/A 0.149±0.00 0.066±0.03 0.007±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A 373.127±0.00
ENSMUST00000144887 N/A 0.154±0.07 0.009±0.00 0.160±0.00 0.200±0.12 0.100±0.00 0.088±0.05 0.159±0.11 N/A N/A N/A 5.832±0.96 1.141±0.00 N/A
ENSMUST00000146741 N/A 0.164±0.04 0.019±0.00 0.230±0.00 0.097±0.04 N/A 0.121±0.07 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151404 N/A N/A N/A N/A 0.091±0.03 0.111±0.03 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834
CIL_00029J CIL_00029J_0002 CGP 9:58006411-58118823
CIL_00045Q CIL_00045Q_0002 CGP 9:58028677-58153996

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005777 IDA peroxisome
GO:0007283 NAS spermatogenesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051858 ccdc33 coiled-coil domain containing 33 protein_coding Danio_rerio
ENSG00000140481 CCDC33 coiled-coil domain containing 33 protein_coding Homo_sapiens

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