C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00045Q_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000051858-ENSDARG00000051874 CGP 7955 25:23059253-23358014
GeneTranscriptPositionBiotype
ENSDARG00000051858 (ccdc33)
coiled-coil domain containing 33 		ENSDART00000073573 (ccdc33-001) 23059253-23086592 protein_coding
ENSDART00000124683 (ccdc33-002) 23063948-23086554 nonsense_mediated_decay
ENSDARG00000051874 (stra6)
stimulated by retinoic acid gene 6 homolog (mouse) 		ENSDART00000067479 (stra6-001) 23310645-23358014 protein_coding
ENSDART00000127831 (stra6-002) 23310635-23318120 processed_transcript
ENSDART00000152096 (stra6-003) 23295635-23357537 protein_coding
ENSDARG00000096969 (si:dkey-240k8.2)
si:dkey-240k8.2 		ENSDART00000155339 (si:dkey-240k8.2-001) 23213028-23215203 lincRNA
CIL_00045Q_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000037716-ENSMUSG00000032327 CGP 10090 9:58028677-58153996
GeneTranscriptPositionBiotype
ENSMUSG00000037716 (Ccdc33)
coiled-coil domain containing 33 		ENSMUST00000042205 (Ccdc33-005) 58028677-58102297 protein_coding
ENSMUST00000098681 (Ccdc33-004) 58111789-58118807 protein_coding
ENSMUST00000098682 (Ccdc33-001) 58028678-58118823 protein_coding
ENSMUST00000119665 (Ccdc33-007) 58028682-58102225 protein_coding
ENSMUST00000123746 (Ccdc33-003) 58086324-58102297 retained_intron
ENSMUST00000143797 (Ccdc33-009) 58033232-58042036 processed_transcript
ENSMUST00000144887 (Ccdc33-008) 58028719-58030976 retained_intron
ENSMUST00000146741 (Ccdc33-010) 58067503-58114360 processed_transcript
ENSMUST00000151404 (Ccdc33-006) 58077013-58082069 retained_intron
ENSMUSG00000085753 (Gm16131)
predicted gene 16131 		ENSMUST00000131007 (Gm16131-001) 58117815-58118989 antisense
ENSMUSG00000086624 (Gm16130)
predicted gene 16130 		ENSMUST00000153106 (Gm16130-001) 58032274-58048997 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045Q_0001ENSDARG00000051858ENSDART00000073573ENSDART00000124683ENSDARG00000051874ENSDART00000067479ENSDART00000127831ENSDART00000152096ENSDARG00000096969ENSDART00000155339CIL_00045Q_0002ENSMUSG00000037716ENSMUST00000042205ENSMUST00000098681ENSMUST00000098682ENSMUST00000119665ENSMUST00000123746ENSMUST00000143797ENSMUST00000144887ENSMUST00000146741ENSMUST00000151404ENSMUSG00000085753ENSMUST00000131007ENSMUSG00000086624ENSMUST00000153106
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00045Q_0001ENSDARG00000051858ENSDART00000073573ENSDART00000124683ENSDARG00000051874ENSDART00000067479ENSDART00000152096ENSDARG00000096969ENSDART00000155339CIL_00045Q_0002ENSMUSG00000037716ENSMUST00000042205ENSMUST00000098681ENSMUST00000098682ENSMUST00000119665ENSMUST00000123746ENSMUST00000143797ENSMUST00000144887ENSMUST00000146741ENSMUST00000151404ENSMUSG00000085753ENSMUST00000131007ENSMUSG00000086624ENSMUST00000153106
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051858 ENSDART00000073573 N/A N/A N/A 0.355±0.27 N/A N/A N/A 0.233±0.01 N/A N/A N/A N/A N/A N/A
ENSDART00000124683 N/A N/A N/A 0.639±0.00 N/A N/A 0.384±0.34 0.029±0.00 0.036±0.00 N/A N/A N/A N/A N/A
ENSDARG00000051874 ENSDART00000067479 N/A N/A N/A 0.795±0.36 N/A N/A 0.019±0.00 N/A N/A N/A 0.142±0.00 N/A N/A N/A
ENSDART00000127831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000152096 N/A N/A N/A 0.737±0.00 N/A N/A 0.090±0.00 1.046±0.00 0.133±0.00 N/A N/A N/A N/A N/A
ENSDARG00000096969 ENSDART00000155339 N/A N/A N/A 19.133±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000037716 ENSMUST00000042205 N/A N/A N/A N/A N/A N/A N/A 0.041±0.00 N/A N/A N/A N/A 0.643±0.00 32.822±10.71
ENSMUST00000098681 0.064±0.05 N/A N/A N/A N/A 0.100±0.05 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000098682 0.040±0.03 0.050±0.03 0.023±0.00 N/A 0.023±0.00 N/A 0.056±0.00 0.032±0.00 N/A 0.499±0.19 0.008±0.00 1.751±0.47 N/A N/A
ENSMUST00000119665 0.031±0.02 0.031±0.00 0.007±0.00 N/A N/A N/A N/A N/A 0.003±0.00 N/A N/A 4.017±0.93 0.067±0.00 18.714±11.21
ENSMUST00000123746 N/A N/A N/A N/A 0.165±0.08 N/A 0.149±0.00 0.066±0.03 0.007±0.00 N/A N/A N/A N/A N/A
ENSMUST00000143797 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.335±0.00 N/A N/A 373.127±0.00
ENSMUST00000144887 N/A 0.154±0.07 0.009±0.00 0.160±0.00 0.200±0.12 0.100±0.00 0.088±0.05 0.159±0.11 N/A N/A N/A 5.832±0.96 1.141±0.00 N/A
ENSMUST00000146741 N/A 0.164±0.04 0.019±0.00 0.230±0.00 0.097±0.04 N/A 0.121±0.07 N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151404 N/A N/A N/A N/A 0.091±0.03 0.111±0.03 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085753 ENSMUST00000131007 0.748±0.00 N/A N/A N/A N/A N/A 0.247±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000086624 ENSMUST00000153106 0.048±0.00 0.075±0.03 N/A 0.115±0.00 0.036±0.02 N/A 0.010±0.00 N/A N/A N/A N/A 1.578±0.37 0.307±0.05 N/A

Loading