C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: REST corepressor 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037896 Rcor1 10090 + 12:111039351-111115901 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000084968 Rcor1-001 111039351-111115901 protein_coding
  ENSMUST00000116388 Rcor1-201 111039798-111113384 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084968ENSMUST00000116388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084968 0.891±0.16 2.254±1.79 2.439±0.13 2.651±2.15 0.690±0.04 4.313±2.34 2.091±1.21 2.287±2.14 5.623±4.15 8.282±0.00 1.656±0.47 3.245±3.03 12.637±4.15 1.570±0.69
ENSMUST00000116388 N/A N/A N/A 2.390±0.32 N/A N/A 1.144±0.21 N/A 1.114±0.00 2.221±0.25 0.667±0.00 7.840±5.60 21.529±7.35 3.798±0.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_00040S CIL_00040S_0002 CGP 12:110975353-111115901

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001078 IEA RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription
GO:0003677 IEA DNA binding
GO:0003682 IEA chromatin binding
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0016568 IEA chromatin modification
GO:0017053 IEA transcriptional repressor complex
GO:0030218 IMP erythrocyte differentiation
GO:0044212 IEA transcription regulatory region DNA binding
GO:0045654 IMP positive regulation of megakaryocyte differentiation
GO:0045892 IEA negative regulation of transcription, DNA-templated
GO:0070933 IEA histone H4 deacetylation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000031434 rcor1 REST corepressor 1 protein_coding Danio_rerio
ENSG00000089902 RCOR1 REST corepressor 1 protein_coding Homo_sapiens

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