C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: REST corepressor 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084968 Rcor1-001 ENSMUSG00000037896 10090 + 12:111039351-111115901 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000084968
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000084968 0.891±0.16 2.254±1.79 2.439±0.13 2.651±2.15 0.690±0.04 4.313±2.34 2.091±1.21 2.287±2.14 5.623±4.15 8.282±0.00 1.656±0.47 3.245±3.03 12.637±4.15 1.570±0.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009AG CIL_0009AG_0002 VISTA 12:110842738-111443613
CIL_00040S CIL_00040S_0002 CGP 12:110975353-111115901

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003682 IEA chromatin binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000262241 RCOR1-001 protein_coding Homo_sapiens 0 2577
ENST00000560472 RCOR1-003 nonsense_mediated_decay Homo_sapiens 0 383

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