C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: FYVE, RhoGEF and PH domain containing 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037946 Fgd3 10090 - 13:49261554-49320311 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000048716 Fgd3-002 49263110-49299020 protein_coding
  ENSMUST00000110086 Fgd3-003 49273382-49320311 protein_coding
  ENSMUST00000110087 Fgd3-001 49261554-49309240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000048716ENSMUST00000110086ENSMUST00000110087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000048716 0.763±0.18 0.514±0.00 N/A N/A 1.589±0.00 1.020±0.33 N/A 1.062±0.23 0.052±0.00 0.667±0.18 0.062±0.00 1.562±0.66 N/A 0.075±0.04
ENSMUST00000110086 N/A 0.673±0.00 N/A 0.741±0.00 N/A N/A N/A N/A N/A N/A 0.324±0.00 N/A N/A 0.076±0.00
ENSMUST00000110087 0.614±0.19 0.655±0.09 1.107±0.19 1.748±0.86 2.502±1.26 0.890±0.62 0.419±0.08 0.966±0.33 0.442±0.34 1.136±0.70 0.327±0.31 1.875±1.68 9.560±5.78 0.137±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0046847 IDA filopodium assembly
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000127084 FGD3 FYVE, RhoGEF and PH domain containing 3 protein_coding Homo_sapiens

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