C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE, RhoGEF and PH domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000048716 Fgd3-002 ENSMUSG00000037946 10090 - 13:49263110-49299020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungMuscleOvaryTestisENSMUST00000048716
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENSMUST00000048716 0.763±0.18 0.514±0.00 1.589±0.00 1.020±0.33 1.062±0.23 0.052±0.00 0.667±0.18 0.062±0.00 1.562±0.66 0.075±0.04

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337352 FGD3-201 protein_coding Homo_sapiens 0 1411
ENST00000375482 FGD3-001 protein_coding Homo_sapiens 0 1411
ENST00000416701 FGD3-202 protein_coding Homo_sapiens 0 1411
ENST00000467786 FGD3-002 nonsense_mediated_decay Homo_sapiens 0 1411
ENST00000488407 FGD3-003 processed_transcript Homo_sapiens 1e-28 130
ENST00000494553 FGD3-004 processed_transcript Homo_sapiens 2e-33 145

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