C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: FYVE, RhoGEF and PH domain containing 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000110087 Fgd3-001 ENSMUSG00000037946 10090 - 13:49261554-49309240 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000110087
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000110087 0.614±0.19 0.655±0.09 1.107±0.19 1.748±0.86 2.502±1.26 0.890±0.62 0.419±0.08 0.966±0.33 0.442±0.34 1.136±0.70 0.327±0.31 1.875±1.68 9.560±5.78 0.137±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005089 IEA Rho guanyl-nucleotide exchange factor activity
GO:0032321 IEA positive regulation of Rho GTPase activity
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000337352 FGD3-201 protein_coding Homo_sapiens 0 1411
ENST00000375482 FGD3-001 protein_coding Homo_sapiens 0 1411
ENST00000416701 FGD3-202 protein_coding Homo_sapiens 0 1411
ENST00000467786 FGD3-002 nonsense_mediated_decay Homo_sapiens 0 1411
ENST00000488407 FGD3-003 processed_transcript Homo_sapiens 1e-28 130
ENST00000494553 FGD3-004 processed_transcript Homo_sapiens 2e-33 145

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