C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH type containing 7 A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000037965 Zc3h7a 10090 - 16:11136592-11176393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037633 Zc3h7a-001 11136592-11176393 protein_coding
  ENSMUST00000125537 Zc3h7a-007 11161048-11175565 protein_coding
  ENSMUST00000128083 Zc3h7a-006 11148513-11174977 protein_coding
  ENSMUST00000130355 Zc3h7a-008 11156528-11174944 protein_coding
  ENSMUST00000138185 Zc3h7a-002 11145210-11176100 protein_coding
  ENSMUST00000138282 Zc3h7a-015 11137126-11140891 retained_intron
  ENSMUST00000139391 Zc3h7a-016 11151284-11152748 retained_intron
  ENSMUST00000140755 Zc3h7a-009 11140809-11176341 nonsense_mediated_decay
  ENSMUST00000140775 Zc3h7a-018 11147362-11151418 retained_intron
  ENSMUST00000140898 Zc3h7a-017 11140715-11148510 nonsense_mediated_decay
  ENSMUST00000142389 Zc3h7a-005 11161058-11176064 protein_coding
  ENSMUST00000142844 Zc3h7a-010 11153015-11158741 retained_intron
  ENSMUST00000143121 Zc3h7a-014 11139043-11141907 retained_intron
  ENSMUST00000143926 Zc3h7a-013 11145396-11147360 retained_intron
  ENSMUST00000145457 Zc3h7a-003 11154183-11158763 retained_intron
  ENSMUST00000155255 Zc3h7a-004 11163471-11176342 retained_intron
  ENSMUST00000155340 Zc3h7a-011 11151677-11156076 retained_intron
  ENSMUST00000155343 Zc3h7a-012 11150292-11151222 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037633ENSMUST00000140755ENSMUST00000140775ENSMUST00000140898ENSMUST00000142844ENSMUST00000143121ENSMUST00000145457
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037633 6.673±1.85 4.168±0.31 22.865±3.38 10.466±6.86 4.720±1.85 9.338±2.01 1.419±0.50 4.571±1.80 19.172±37.53 7.934±0.72 1.496±0.49 3.563±0.81 6.299±0.90 7.263±0.63
ENSMUST00000140755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.402±0.00 N/A N/A
ENSMUST00000140775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.962±0.00 N/A N/A
ENSMUST00000140898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.798±6.12 N/A
ENSMUST00000142844 20.948±2.07 6.425±0.46 N/A N/A 16.373±7.24 15.039±1.97 7.265±0.41 8.980±1.16 6.334±1.03 20.366±2.26 N/A 12.005±3.68 N/A N/A
ENSMUST00000143121 N/A N/A N/A 69.654±0.00 N/A N/A N/A N/A N/A N/A N/A 255.382±0.00 144.800±9.42 38.548±0.00
ENSMUST00000145457 N/A N/A N/A N/A 2.315±0.74 N/A N/A N/A 1.683±0.00 N/A N/A 2.158±0.35 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DU CIL_0007DU_0002 CGP 16:11074911-11176393
CIL_0007DT CIL_0007DT_0002 CGP 16:11136592-11203331

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021047 zc3h7a zinc finger CCCH-type containing 7A protein_coding Danio_rerio
ENSG00000122299 ZC3H7A zinc finger CCCH-type containing 7A protein_coding Homo_sapiens

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