C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger CCCH-type containing 7A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000122299 ZC3H7A 9606 - 16:11750586-11797267 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355758 ZC3H7A-001 11750586-11797267 protein_coding
  ENST00000396516 ZC3H7A-003 11750586-11782552 protein_coding
  ENST00000570862 ZC3H7A-011 11756322-11761662 retained_intron
  ENST00000570918 ZC3H7A-016 11750591-11753162 retained_intron
  ENST00000571198 ZC3H7A-002 11756329-11797232 protein_coding
  ENST00000571405 ZC3H7A-004 11750595-11765561 nonsense_mediated_decay
  ENST00000571676 ZC3H7A-015 11764965-11770841 retained_intron
  ENST00000572781 ZC3H7A-012 11779262-11797246 protein_coding
  ENST00000572870 ZC3H7A-006 11776758-11783034 protein_coding
  ENST00000572938 ZC3H7A-009 11761948-11763229 retained_intron
  ENST00000574995 ZC3H7A-013 11779290-11796952 protein_coding
  ENST00000575041 ZC3H7A-017 11765517-11774292 nonsense_mediated_decay
  ENST00000575170 ZC3H7A-007 11775527-11797229 processed_transcript
  ENST00000575984 ZC3H7A-010 11750593-11759850 protein_coding
  ENST00000576009 ZC3H7A-008 11767437-11776520 protein_coding
  ENST00000576018 ZC3H7A-014 11779240-11796527 protein_coding
  ENST00000576247 ZC3H7A-005 11765575-11768521 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000355758ENST00000570918ENST00000571198ENST00000571405ENST00000575984ENST00000576009ENST00000576247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000355758 3.610±0.00 4.601±0.00 N/A 1.858±1.05 5.081±0.00 2.515±0.00 3.084±2.28 3.005±2.62 2.806±0.69 2.849±0.26 4.323±2.92 4.548±2.78 4.431±2.12 5.245±0.00
ENST00000570918 N/A N/A N/A 1.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571198 2.032±0.00 N/A N/A 1.268±0.00 N/A N/A N/A N/A N/A 2.266±0.00 N/A 2.257±0.00 4.026±0.00 2.047±0.00
ENST00000571405 4.322±0.00 5.644±0.00 N/A 1.745±0.00 5.239±0.00 4.374±0.00 2.212±0.00 6.121±0.00 3.040±0.00 2.768±0.00 N/A 4.271±0.66 8.812±0.00 3.790±0.14
ENST00000575984 N/A 2.280±0.00 N/A N/A N/A N/A N/A 1.008±0.00 N/A N/A 0.803±0.00 1.096±0.00 N/A N/A
ENST00000576009 N/A N/A 4.397±0.00 N/A N/A N/A N/A N/A N/A N/A 2.515±0.00 N/A N/A N/A
ENST00000576247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.641±0.00 15.843±0.00 10.184±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007DU CIL_0007DU_0001 CGP 16:11679080-11797267
CIL_0007DT CIL_0007DT_0001 CGP 16:11750586-11851585

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000021047 zc3h7a zinc finger CCCH-type containing 7A protein_coding Danio_rerio
ENSMUSG00000037965 Zc3h7a zinc finger CCCH type containing 7 A protein_coding Mus_musculus

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