C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007DU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000153066-ENSG00000122299 CGP 9606 16:11679080-11797267
GeneTranscriptPositionBiotype
ENSG00000122299 (ZC3H7A)
zinc finger CCCH-type containing 7A 		ENST00000355758 (ZC3H7A-001) 11750586-11797267 protein_coding
ENST00000396516 (ZC3H7A-003) 11750586-11782552 protein_coding
ENST00000570862 (ZC3H7A-011) 11756322-11761662 retained_intron
ENST00000570918 (ZC3H7A-016) 11750591-11753162 retained_intron
ENST00000571198 (ZC3H7A-002) 11756329-11797232 protein_coding
ENST00000571405 (ZC3H7A-004) 11750595-11765561 nonsense_mediated_decay
ENST00000571676 (ZC3H7A-015) 11764965-11770841 retained_intron
ENST00000572781 (ZC3H7A-012) 11779262-11797246 protein_coding
ENST00000572870 (ZC3H7A-006) 11776758-11783034 protein_coding
ENST00000572938 (ZC3H7A-009) 11761948-11763229 retained_intron
ENST00000574995 (ZC3H7A-013) 11779290-11796952 protein_coding
ENST00000575041 (ZC3H7A-017) 11765517-11774292 nonsense_mediated_decay
ENST00000575170 (ZC3H7A-007) 11775527-11797229 processed_transcript
ENST00000575984 (ZC3H7A-010) 11750593-11759850 protein_coding
ENST00000576009 (ZC3H7A-008) 11767437-11776520 protein_coding
ENST00000576018 (ZC3H7A-014) 11779240-11796527 protein_coding
ENST00000576247 (ZC3H7A-005) 11765575-11768521 retained_intron
ENSG00000153066 (TXNDC11)
thioredoxin domain containing 11 		ENST00000283033 (TXNDC11-001) 11679080-11742878 protein_coding
ENST00000356957 (TXNDC11-002) 11679083-11742838 protein_coding
ENST00000570917 (TXNDC11-006) 11679083-11690097 processed_transcript
ENST00000571882 (TXNDC11-010) 11692050-11733999 nonsense_mediated_decay
ENST00000572732 (TXNDC11-004) 11690734-11692242 retained_intron
ENST00000573174 (TXNDC11-007) 11698134-11742794 processed_transcript
ENST00000575349 (TXNDC11-011) 11684235-11688568 retained_intron
ENST00000575591 (TXNDC11-009) 11691990-11736130 protein_coding
ENST00000576969 (TXNDC11-008) 11692014-11742547 nonsense_mediated_decay
ENSG00000184602 (SNN)
stannin 		ENST00000329565 (SNN-001) 11668414-11679159 protein_coding
ENSG00000274505 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000597717 (Metazoa_SRP.1-282) 11753666-11753948 misc_RNA
CIL_0007DU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022498-ENSMUSG00000037965 CGP 10090 16:11074911-11176393
GeneTranscriptPositionBiotype
ENSMUSG00000022498 (Txndc11)
thioredoxin domain containing 11 		ENSMUST00000038424 (Txndc11-001) 11074911-11134650 protein_coding
ENSMUST00000118362 (Txndc11-002) 11085519-11134611 protein_coding
ENSMUST00000118679 (Txndc11-003) 11114063-11134613 protein_coding
ENSMUST00000131012 (Txndc11-005) 11088272-11122737 processed_transcript
ENSMUST00000145225 (Txndc11-006) 11087235-11134573 nonsense_mediated_decay
ENSMUST00000146081 (Txndc11-007) 11084752-11087352 processed_transcript
ENSMUST00000147884 (Txndc11-004) 11105957-11134650 nonsense_mediated_decay
ENSMUST00000148183 (Txndc11-008) 11075425-11084785 retained_intron
ENSMUST00000155221 (Txndc11-009) 11104611-11134553 nonsense_mediated_decay
ENSMUSG00000037965 (Zc3h7a)
zinc finger CCCH type containing 7 A 		ENSMUST00000037633 (Zc3h7a-001) 11136592-11176393 protein_coding
ENSMUST00000125537 (Zc3h7a-007) 11161048-11175565 protein_coding
ENSMUST00000128083 (Zc3h7a-006) 11148513-11174977 protein_coding
ENSMUST00000130355 (Zc3h7a-008) 11156528-11174944 protein_coding
ENSMUST00000138185 (Zc3h7a-002) 11145210-11176100 protein_coding
ENSMUST00000138282 (Zc3h7a-015) 11137126-11140891 retained_intron
ENSMUST00000139391 (Zc3h7a-016) 11151284-11152748 retained_intron
ENSMUST00000140755 (Zc3h7a-009) 11140809-11176341 nonsense_mediated_decay
ENSMUST00000140775 (Zc3h7a-018) 11147362-11151418 retained_intron
ENSMUST00000140898 (Zc3h7a-017) 11140715-11148510 nonsense_mediated_decay
ENSMUST00000142389 (Zc3h7a-005) 11161058-11176064 protein_coding
ENSMUST00000142844 (Zc3h7a-010) 11153015-11158741 retained_intron
ENSMUST00000143121 (Zc3h7a-014) 11139043-11141907 retained_intron
ENSMUST00000143926 (Zc3h7a-013) 11145396-11147360 retained_intron
ENSMUST00000145457 (Zc3h7a-003) 11154183-11158763 retained_intron
ENSMUST00000155255 (Zc3h7a-004) 11163471-11176342 retained_intron
ENSMUST00000155340 (Zc3h7a-011) 11151677-11156076 retained_intron
ENSMUST00000155343 (Zc3h7a-012) 11150292-11151222 retained_intron
ENSMUSG00000037972 (Snn)
stannin 		ENSMUST00000089011 (Snn-201) 11066298-11074983 protein_coding
ENSMUSG00000064565 (Gm24145)
predicted gene, 24145 		ENSMUST00000082631 (Gm24145-201) 11167105-11167267 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DU_0001ENSG00000122299ENST00000355758ENST00000396516ENST00000570862ENST00000570918ENST00000571198ENST00000571405ENST00000571676ENST00000572781ENST00000572870ENST00000572938ENST00000574995ENST00000575041ENST00000575170ENST00000575984ENST00000576009ENST00000576018ENST00000576247ENSG00000153066ENST00000283033ENST00000356957ENST00000570917ENST00000571882ENST00000572732ENST00000573174ENST00000575349ENST00000575591ENST00000576969ENSG00000184602ENST00000329565ENSG00000274505ENST00000597717CIL_0007DU_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007DU_0001ENSG00000122299ENST00000355758ENST00000570918ENST00000571198ENST00000571405ENST00000575984ENST00000576009ENST00000576247ENSG00000153066ENST00000283033ENST00000356957ENST00000570917ENSG00000184602ENST00000329565ENSG00000274505ENST00000597717CIL_0007DU_0002ENSMUSG00000022498ENSMUST00000038424ENSMUST00000118362ENSMUST00000131012ENSMUST00000145225ENSMUST00000155221ENSMUSG00000037965ENSMUST00000037633ENSMUST00000140755ENSMUST00000140775ENSMUST00000140898ENSMUST00000142844ENSMUST00000143121ENSMUST00000145457ENSMUSG00000037972ENSMUST00000089011ENSMUSG00000064565ENSMUST00000082631
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000122299 ENST00000355758 3.610±0.00 4.601±0.00 N/A 1.858±1.05 5.081±0.00 2.515±0.00 3.084±2.28 3.005±2.62 2.806±0.69 2.849±0.26 4.323±2.92 4.548±2.78 4.431±2.12 5.245±0.00
ENST00000396516 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570862 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570918 N/A N/A N/A 1.583±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000571198 2.032±0.00 N/A N/A 1.268±0.00 N/A N/A N/A N/A N/A 2.266±0.00 N/A 2.257±0.00 4.026±0.00 2.047±0.00
ENST00000571405 4.322±0.00 5.644±0.00 N/A 1.745±0.00 5.239±0.00 4.374±0.00 2.212±0.00 6.121±0.00 3.040±0.00 2.768±0.00 N/A 4.271±0.66 8.812±0.00 3.790±0.14
ENST00000571676 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572781 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572870 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572938 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000574995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575041 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575170 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575984 N/A 2.280±0.00 N/A N/A N/A N/A N/A 1.008±0.00 N/A N/A 0.803±0.00 1.096±0.00 N/A N/A
ENST00000576009 N/A N/A 4.397±0.00 N/A N/A N/A N/A N/A N/A N/A 2.515±0.00 N/A N/A N/A
ENST00000576018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576247 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.641±0.00 15.843±0.00 10.184±0.00
ENSG00000153066 ENST00000283033 9.944±0.00 13.461±0.00 2.425±0.00 N/A 5.720±3.21 2.267±0.00 5.769±0.00 11.352±2.79 2.933±0.00 12.114±4.42 6.110±4.85 6.202±5.30 11.093±1.63 5.342±3.23
ENST00000356957 N/A N/A N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570917 N/A N/A N/A N/A N/A N/A N/A 5.142±0.00 8.598±0.00 N/A N/A 9.543±6.62 18.490±0.00 11.043±0.00
ENST00000571882 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000572732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000573174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575349 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000575591 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576969 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000184602 ENST00000329565 31.354±0.00 19.735±0.00 1.352±0.00 39.886±29.40 18.740±16.25 7.270±6.06 5.470±4.50 6.345±4.09 3.525±0.21 14.924±11.90 25.667±0.00 8.012±6.17 5.615±0.78 5.800±3.66
ENSG00000274505 ENST00000597717 0.604±0.00 0.878±0.00 N/A 0.491±0.00 0.592±0.00 N/A N/A 0.981±0.00 0.057±0.00 0.487±0.00 N/A 0.317±0.00 0.285±0.00 0.175±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022498 ENSMUST00000038424 10.016±1.49 9.530±3.75 6.390±1.57 N/A 10.843±2.60 15.630±5.22 4.492±0.25 10.956±0.92 8.389±2.34 9.831±2.98 1.264±0.73 15.745±4.78 18.060±5.13 3.922±0.25
ENSMUST00000118362 3.383±0.00 N/A 2.075±0.00 N/A N/A N/A N/A N/A 1.926±0.54 N/A 0.396±0.08 3.408±0.14 3.668±1.28 N/A
ENSMUST00000118679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131012 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 16.406±0.00 N/A
ENSMUST00000145225 N/A 7.725±1.56 N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.796±0.20 N/A N/A
ENSMUST00000146081 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147884 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000148183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155221 N/A 28.441±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037965 ENSMUST00000037633 6.673±1.85 4.168±0.31 22.865±3.38 10.466±6.86 4.720±1.85 9.338±2.01 1.419±0.50 4.571±1.80 19.172±37.53 7.934±0.72 1.496±0.49 3.563±0.81 6.299±0.90 7.263±0.63
ENSMUST00000125537 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000128083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000130355 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000138282 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139391 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140755 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.402±0.00 N/A N/A
ENSMUST00000140775 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.962±0.00 N/A N/A
ENSMUST00000140898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 46.798±6.12 N/A
ENSMUST00000142389 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000142844 20.948±2.07 6.425±0.46 N/A N/A 16.373±7.24 15.039±1.97 7.265±0.41 8.980±1.16 6.334±1.03 20.366±2.26 N/A 12.005±3.68 N/A N/A
ENSMUST00000143121 N/A N/A N/A 69.654±0.00 N/A N/A N/A N/A N/A N/A N/A 255.382±0.00 144.800±9.42 38.548±0.00
ENSMUST00000143926 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000145457 N/A N/A N/A N/A 2.315±0.74 N/A N/A N/A 1.683±0.00 N/A N/A 2.158±0.35 N/A N/A
ENSMUST00000155255 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155340 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155343 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000037972 ENSMUST00000089011 22.411±2.07 11.629±2.47 11.232±1.78 72.900±20.82 31.781±11.60 6.665±0.78 11.207±0.29 33.202±1.93 3.228±0.82 28.925±2.50 2.020±1.33 18.240±3.95 4.686±1.45 9.668±4.88
ENSMUSG00000064565 ENSMUST00000082631 N/A N/A 3.636±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 4.515±0.00 N/A N/A

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