C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RIKEN cDNA 2700029M09 gene
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038005 2700029M09Rik 10090 + 8:60890418-60907580 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000037190 2700029M09Rik-001 60890451-60907580 protein_coding
  ENSMUST00000134886 2700029M09Rik-003 60890489-60897048 retained_intron
  ENSMUST00000136098 2700029M09Rik-004 60890451-60905985 nonsense_mediated_decay
  ENSMUST00000146863 2700029M09Rik-005 60890418-60907575 nonsense_mediated_decay
  ENSMUST00000149267 2700029M09Rik-002 60890445-60907573 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000037190ENSMUST00000134886ENSMUST00000136098ENSMUST00000146863ENSMUST00000149267
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000037190 1.067±0.36 0.602±0.22 6.891±0.91 7.883±0.00 0.861±0.33 0.567±0.24 1.387±0.41 1.276±0.26 12.345±12.41 N/A 2.054±0.52 5.081±5.42 12.076±5.45 4.726±1.18
ENSMUST00000134886 N/A N/A N/A N/A 0.766±0.07 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136098 0.249±0.00 0.475±0.15 3.108±0.00 N/A 0.758±0.35 0.538±0.20 0.997±0.28 0.658±0.05 0.830±0.00 0.887±0.00 0.957±0.00 0.482±0.25 2.910±0.00 N/A
ENSMUST00000146863 1.209±0.05 1.291±0.49 N/A N/A 0.811±0.00 1.098±0.25 1.873±0.08 1.357±0.52 0.734±0.37 1.806±0.59 3.408±0.00 1.197±0.48 N/A N/A
ENSMUST00000149267 N/A 0.491±0.00 N/A 13.056±9.47 1.213±0.15 0.841±0.16 1.106±0.25 0.802±0.34 1.356±0.37 1.487±0.00 0.906±0.07 6.780±12.74 12.911±7.45 6.501±4.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000057114 C1H4orf27 chromosome 4 open reading frame 27 protein_coding Danio_rerio
ENSG00000056050 C4orf27 chromosome 4 open reading frame 27 protein_coding Homo_sapiens

Loading