C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2700029M09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000149267 2700029M09Rik-002 ENSMUSG00000038005 10090 + 8:60890445-60907573 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000149267
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000149267 0.491±0.00 13.056±9.47 1.213±0.15 0.841±0.16 1.106±0.25 0.802±0.34 1.356±0.37 1.487±0.00 0.906±0.07 6.780±12.74 12.911±7.45 6.501±4.70

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393381 C4orf27-001 protein_coding Homo_sapiens 0 841
ENST00000502889 RP11-54D18.2-001 unprocessed_pseudogene Homo_sapiens 0 785
ENST00000506125 C4orf27-002 retained_intron Homo_sapiens 0 257
ENST00000515204 C4orf27-003 retained_intron Homo_sapiens 0 394

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