C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 2700029M09 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000146863 2700029M09Rik-005 ENSMUSG00000038005 10090 + 8:60890418-60907575 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000146863
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000146863 1.209±0.05 1.291±0.49 0.811±0.00 1.098±0.25 1.873±0.08 1.357±0.52 0.734±0.37 1.806±0.59 3.408±0.00 1.197±0.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393381 C4orf27-001 protein_coding Homo_sapiens 0 394
ENST00000502889 RP11-54D18.2-001 unprocessed_pseudogene Homo_sapiens 0 366
ENST00000515204 C4orf27-003 retained_intron Homo_sapiens 0 398

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